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The map label for this gene is insD1 [C]

Identifier: 82703520

GI number: 82703520

Start: 2742706

End: 2743551

Strand: Reverse

Name: insD1 [C]

Synonym: Nmul_A2405

Alternate gene names: 82703520

Gene position: 2743551-2742706 (Counterclockwise)

Preceding gene: 82703521

Following gene: 82703511

Centisome position: 86.16

GC content: 53.9

Gene sequence:

>846_bases
GTGAAGGCCATTGCAGACACCATGGGTGTGGCGCGCTCCCGTCTTGTGGAACGGATGAAGCCGCAGGAAAAGTCTTTTCG
TTGCCGCTACAACAAGGCTGATGATGCCTGGCTGTTGCCCTTGATCCGCGAAATTGTGGATTGCCGCGCGACCTACGGAT
ACAGAAGGATTTGCGCTCTCCTTAACCGCAAACTGGAGAGAATGGGAAAGCCTGCTGTCAATCACAAGCGGGTCTATCGC
ATCATGCGCCAGAATGGCCTGCTGGCCCGATATACGGGCAAACAGCGCGTGCTGTCTCATGAAGGCAAGGTCATTACCTT
GCGTTCCAATTTGCGCTGGTGTTCGGATGGTTTTGAGATTCCCTGCTGGAATGGGCAAGTAGTGCGTGTTGCCTTCGCCC
TGGATTGCTGTGATCGTGAAGTCATCAGCCATGTTGCCACCACTGGCGGCATTACTGGGGAAATGGTGCGCGATCTGATG
ACTGAATCCGTTGAGCGGCGCTTCGGCACCGTTGACCTGCTCCCACACAGGGTGGAGTGGCTCAGCGACAATGGCAGTTG
TTACACCGCCAGCGAGACAACTGCTTTTGCAAAGGATATGGGCTTCATCAGCTGTTTTACTCCCGTCAGAAGCCCCGAAT
CCAACGGCATGGCCGAGGCCTTCGTCAAAACCTTCAAGCGGGATTACGTCTATGTCCATGATCGTCCCGACGCAAAAACC
GTAATAGCGCAGCTTGCCCAATGGTTCGAGGATTACAATGAATACCATCCTCACAAGGGGCTGAAGATGAAGTCACCACG
ACAATTCATCCGCAGCCAGTTACTAACCGCATCTTGTCCGGTTTAA

Upstream 100 bases:

>100_bases
AGAAAACCCTGGAGAATGAGATTCTCACGGAAGCGGTGAAGCTTGCGCATGAAAAAAAACTGATCTCGCGCATGCCCTTG
CTGCCACAGGACGATTTGCT

Downstream 100 bases:

>100_bases
TAGGGGCAACTCCACATCTCGCGTGGCTGCTTCACAAGCATTCTCGCTATCACTTTCCTCGGGTTTTAATCATCCATTTG
ACAACATTTTCAATTCCCTC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICALLNRKLERMGKPAVNHKRVYR
IMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEIPCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLM
TESVERRFGTVDLLPHRVEWLSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV

Sequences:

>Translated_281_residues
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICALLNRKLERMGKPAVNHKRVYR
IMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEIPCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLM
TESVERRFGTVDLLPHRVEWLSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV
>Mature_281_residues
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICALLNRKLERMGKPAVNHKRVYR
IMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEIPCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLM
TESVERRFGTVDLLPHRVEWLSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1789424, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1789224, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1788305, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1787669, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1786558, Length=247, Percent_Identity=51.8218623481781, Blast_Score=248, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 32328; Mature: 32328

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICAL
CCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LNRKLERMGKPAVNHKRVYRIMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEI
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCC
PCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLMTESVERRFGTVDLLPHRVEW
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHH
LSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
CCCCCCEEECCCHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICAL
CCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LNRKLERMGKPAVNHKRVYRIMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEI
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCC
PCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLMTESVERRFGTVDLLPHRVEW
CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHH
LSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
CCCCCCEEECCCHHHHHHHCCHHEECCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHH
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA