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The map label for this gene is insC1 [C]

Identifier: 82703521

GI number: 82703521

Start: 2743548

End: 2743973

Strand: Reverse

Name: insC1 [C]

Synonym: Nmul_A2406

Alternate gene names: 82703521

Gene position: 2743973-2743548 (Counterclockwise)

Preceding gene: 82703525

Following gene: 82703520

Centisome position: 86.17

GC content: 53.05

Gene sequence:

>426_bases
ATGATAGGAGATAGGCATATGCCTGGTGCTATGCATAGTGCTTCAGGTTTGGATCGTATTGAAGTAGTAACCGGGGTTGA
GCGCCGCAGGCGCTGGACCCTGGGTGAGAAATTAAAAGCTGTTGAGGAATCGCGCTTGCCGGGCATGAGTGTCTCGTATG
TGGCGCGAAAATATGGTATTGCTCCGAGCTTGTTATTTCGCTGGAGGAAGCTTATGACCGAGGGCGGACAAGAAGCAGTG
CGTAGTGGTGATGCGGTAGTGTCTGCGGCCGAGGTGAAAGAGTTGAAGAAGCGGATCCGGGAGTTGGAGCGGGTGCTGGG
CAAGAAAACCCTGGAGAATGAGATTCTCACGGAAGCGGTGAAGCTTGCGCATGAAAAAAAACTGATCTCGCGCATGCCCT
TGCTGCCACAGGACGATTTGCTGTGA

Upstream 100 bases:

>100_bases
CCCGGCATTGTAATTGACGATTACGGCCGAGATGCAAAGGGGATTCGAATCATCATCCATCTTGTAGTAGCCCCCAATTG
AACCGGACACAGATGCACTG

Downstream 100 bases:

>100_bases
AGGCCATTGCAGACACCATGGGTGTGGCGCGCTCCCGTCTTGTGGAACGGATGAAGCCGCAGGAAAAGTCTTTTCGTTGC
CGCTACAACAAGGCTGATGA

Product: transposase IS3/IS911

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIGDRHMPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMTEGGQEAV
RSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPQDDLL

Sequences:

>Translated_141_residues
MIGDRHMPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMTEGGQEAV
RSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPQDDLL
>Mature_141_residues
MIGDRHMPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGIAPSLLFRWRKLMTEGGQEAV
RSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAVKLAHEKKLISRMPLLPQDDLL

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI145693180, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI145693177, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI145693154, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI145693126, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI145693097, Length=116, Percent_Identity=52.5862068965517, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 15916; Mature: 15916

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGDRHMPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGI
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
APSLLFRWRKLMTEGGQEAVRSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAV
CHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAHEKKLISRMPLLPQDDLL
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIGDRHMPGAMHSASGLDRIEVVTGVERRRRWTLGEKLKAVEESRLPGMSVSYVARKYGI
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
APSLLFRWRKLMTEGGQEAVRSGDAVVSAAEVKELKKRIRELERVLGKKTLENEILTEAV
CHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAHEKKLISRMPLLPQDDLL
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA