| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is 82703426
Identifier: 82703426
GI number: 82703426
Start: 2626346
End: 2628229
Strand: Direct
Name: 82703426
Synonym: Nmul_A2309
Alternate gene names: NA
Gene position: 2626346-2628229 (Clockwise)
Preceding gene: 82703425
Following gene: 82703428
Centisome position: 82.48
GC content: 59.71
Gene sequence:
>1884_bases ATGAGCAAACCTATCGAAGAATACGGATTCATCGGTAACATGCTGAGCGGAGCGCTCGTCGCCCGTGATGGCTCGATGGA TTGGCTTTGCCTTCCACGGTTCGATTCCGATGCATGCTTCGCCGCACTGCTGGGGGCATCCAAGCATGGTTATTGGCAGA TTTCCCCGGCTGGCGAGAGTAACCGCTCTAGTCGGCGTTATCTGCCCCATGCACCGGTCCTCGAAACCACCTTCGAGACA GAGGGTGGCATCGTGACGCTCGTGGATTTCATGCCGCTTTCAAATGACCCCGAGAGAGTCGATGTCGTTCGCCTTGTACA GGGGGTGTCGGGCAAGGTGCGGATGCGGATGGAGTTGGCCCTGCGCTTCGGCTACGGCAAGACCATTCCCTGGGTACGCC GCCGCGACTACGGCATCCACGCCGTTGCCGGCCCGGATGCGGTGGAACTGGCAACTCCTGTCACCCTGCGCGGCGAGGAC ATGCGCACCGTTGCCGAGTTCGAGGTGGGAGAAGGCGACGTTATCCCCTTCACGCTCGCCTATCATCCCCTACATCGAGA GCCTCACTTCATTGACGACGGCAGGAAGAGGCTCGAGCACACACTTGCCTGGTGGCGGGAATGGACCCGTATCTGCCAGC TCTCGGAACTGGAGGAACCCGGATGGAACGATGCAGTCGAGCGTTCGCTCATTACGCTCAAGGCACTCTCCTACCAACCA AGCGGGGGCATCGTCGCGGCGCTTACGACCTCCCTCCCCGAAGAGCTCGGCGGAGTCCGAAACTGGGATTACCGCTACTG CTGGATCCGCGACGCCACACTCACGTTATATGCATTCATGAATGCAGGATGCTTCGACGAGGCCGGGGCATTCAGGGAAT GGATGCTTCGAGCGGCTGCGGGCGCCCCTGATCAGATGCAAATCATGTATGGGATCGAGGGTGAACGCCGCCTGACTGAA ATCGAACTGCCTTGGCTGCCGGGTTACGAGAACAGCCTCCCCGTGCGCATCGGCAACGGTGCGCATGAGCAGATTCAGGT AGACGTGTTTGGCGAACTGATGGACACACTTTATACCGCCCGCAAGTCGCAACTCGGGCCGCATCAGGAAGCCTGGCGGT TTCAGCAAGCGATTCTTTCCCGACTGGAGAGTCTGTGGCGTGGGCCAGACCAAGGCATCTGGGAGGTGCGCGGTAGCCCC AAGCACTTCGTCTATTCGAAAATGATGGCTTGGGTCGCGTTTGATCGGGCCATAAAAGCTGTGGAGCAATTCGGCTTCCC TGGTCCTGTCGGGAAATGGCGCACGCTCCGCGATGAAATTCATCGGGAAGTGCTGGCGCGCGGCTATGATAAGGAACGGA ACACATTCGTGCAGCATTACGACGGCGTGGGACTGGATGCCTCCCTGCTGCTGATGGCCGAGGTAGGATTTCTCCCACCG GACGATCCCCGCTTTCGGGGAACGGTAGAAGCCATTGAACGCGACCTGATGGAAGATGGACTTGTGCTGCGTTACCGCGT TGGCGAAACCAAAGACGGGCTCGCCGGCGAGGAAGGAACTTTTCTCGTTTGCAGCTTCTGGCTTGCTGATGCCTATACAA TGATCGACCGCGGTCACGATGCGGCAGTTCTTTTCGAGCGCCTCCTGTCTCTACGCAACGACCTCGGGCTTCTTGCCGAG GAATACCACCCCCGCCACCGGCGGCAACTGGGAAACTTCCCCCAAGCGTTTTCCCACGTGGGTTTGATCAATACGGCATA CAACCTTCGCCGCATCAACGGCCCCGCCCAGCAGCGCGCTGATCGCAGCGCGTCGCCTCATGCCACTCACACCTCCTGGA CCGGAACCGCGGGCGAGCAGCACCGCGAACGATCGATAGACTAA
Upstream 100 bases:
>100_bases CGGTGGCACGCTTCGGCACTCTCCATATTCTGGTGAACAACGCCGGAATAATGTTCGCCGATGGCGCAATGTCGACCTAT CCCGCGTTCCGTCGCGCGGG
Downstream 100 bases:
>100_bases ACTCCCTTTCGAAGTTCCGTCACAGGACTTTTTCGACGCATCGAAACACGGTGCAGAGAAAAGCAAGTCTGCCGGCAAAC ATCGATAAGCCAAGACTATA
Product: glycoside hydrolase 15-like protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MSKPIEEYGFIGNMLSGALVARDGSMDWLCLPRFDSDACFAALLGASKHGYWQISPAGESNRSSRRYLPHAPVLETTFET EGGIVTLVDFMPLSNDPERVDVVRLVQGVSGKVRMRMELALRFGYGKTIPWVRRRDYGIHAVAGPDAVELATPVTLRGED MRTVAEFEVGEGDVIPFTLAYHPLHREPHFIDDGRKRLEHTLAWWREWTRICQLSELEEPGWNDAVERSLITLKALSYQP SGGIVAALTTSLPEELGGVRNWDYRYCWIRDATLTLYAFMNAGCFDEAGAFREWMLRAAAGAPDQMQIMYGIEGERRLTE IELPWLPGYENSLPVRIGNGAHEQIQVDVFGELMDTLYTARKSQLGPHQEAWRFQQAILSRLESLWRGPDQGIWEVRGSP KHFVYSKMMAWVAFDRAIKAVEQFGFPGPVGKWRTLRDEIHREVLARGYDKERNTFVQHYDGVGLDASLLLMAEVGFLPP DDPRFRGTVEAIERDLMEDGLVLRYRVGETKDGLAGEEGTFLVCSFWLADAYTMIDRGHDAAVLFERLLSLRNDLGLLAE EYHPRHRRQLGNFPQAFSHVGLINTAYNLRRINGPAQQRADRSASPHATHTSWTGTAGEQHRERSID
Sequences:
>Translated_627_residues MSKPIEEYGFIGNMLSGALVARDGSMDWLCLPRFDSDACFAALLGASKHGYWQISPAGESNRSSRRYLPHAPVLETTFET EGGIVTLVDFMPLSNDPERVDVVRLVQGVSGKVRMRMELALRFGYGKTIPWVRRRDYGIHAVAGPDAVELATPVTLRGED MRTVAEFEVGEGDVIPFTLAYHPLHREPHFIDDGRKRLEHTLAWWREWTRICQLSELEEPGWNDAVERSLITLKALSYQP SGGIVAALTTSLPEELGGVRNWDYRYCWIRDATLTLYAFMNAGCFDEAGAFREWMLRAAAGAPDQMQIMYGIEGERRLTE IELPWLPGYENSLPVRIGNGAHEQIQVDVFGELMDTLYTARKSQLGPHQEAWRFQQAILSRLESLWRGPDQGIWEVRGSP KHFVYSKMMAWVAFDRAIKAVEQFGFPGPVGKWRTLRDEIHREVLARGYDKERNTFVQHYDGVGLDASLLLMAEVGFLPP DDPRFRGTVEAIERDLMEDGLVLRYRVGETKDGLAGEEGTFLVCSFWLADAYTMIDRGHDAAVLFERLLSLRNDLGLLAE EYHPRHRRQLGNFPQAFSHVGLINTAYNLRRINGPAQQRADRSASPHATHTSWTGTAGEQHRERSID >Mature_626_residues SKPIEEYGFIGNMLSGALVARDGSMDWLCLPRFDSDACFAALLGASKHGYWQISPAGESNRSSRRYLPHAPVLETTFETE GGIVTLVDFMPLSNDPERVDVVRLVQGVSGKVRMRMELALRFGYGKTIPWVRRRDYGIHAVAGPDAVELATPVTLRGEDM RTVAEFEVGEGDVIPFTLAYHPLHREPHFIDDGRKRLEHTLAWWREWTRICQLSELEEPGWNDAVERSLITLKALSYQPS GGIVAALTTSLPEELGGVRNWDYRYCWIRDATLTLYAFMNAGCFDEAGAFREWMLRAAAGAPDQMQIMYGIEGERRLTEI ELPWLPGYENSLPVRIGNGAHEQIQVDVFGELMDTLYTARKSQLGPHQEAWRFQQAILSRLESLWRGPDQGIWEVRGSPK HFVYSKMMAWVAFDRAIKAVEQFGFPGPVGKWRTLRDEIHREVLARGYDKERNTFVQHYDGVGLDASLLLMAEVGFLPPD DPRFRGTVEAIERDLMEDGLVLRYRVGETKDGLAGEEGTFLVCSFWLADAYTMIDRGHDAAVLFERLLSLRNDLGLLAEE YHPRHRRQLGNFPQAFSHVGLINTAYNLRRINGPAQQRADRSASPHATHTSWTGTAGEQHRERSID
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71040; Mature: 70909
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPIEEYGFIGNMLSGALVARDGSMDWLCLPRFDSDACFAALLGASKHGYWQISPAGES CCCCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCC NRSSRRYLPHAPVLETTFETEGGIVTLVDFMPLSNDPERVDVVRLVQGVSGKVRMRMELA CCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEE LRFGYGKTIPWVRRRDYGIHAVAGPDAVELATPVTLRGEDMRTVAEFEVGEGDVIPFTLA EEECCCCCCCCHHCCCCCEEEECCCCCCHHCCCEEECCCCCHHHHHEECCCCCEEEEEEE YHPLHREPHFIDDGRKRLEHTLAWWREWTRICQLSELEEPGWNDAVERSLITLKALSYQP ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECC SGGIVAALTTSLPEELGGVRNWDYRYCWIRDATLTLYAFMNAGCFDEAGAFREWMLRAAA CCCEEEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHC GAPDQMQIMYGIEGERRLTEIELPWLPGYENSLPVRIGNGAHEQIQVDVFGELMDTLYTA CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHH RKSQLGPHQEAWRFQQAILSRLESLWRGPDQGIWEVRGSPKHFVYSKMMAWVAFDRAIKA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VEQFGFPGPVGKWRTLRDEIHREVLARGYDKERNTFVQHYDGVGLDASLLLMAEVGFLPP HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCC DDPRFRGTVEAIERDLMEDGLVLRYRVGETKDGLAGEEGTFLVCSFWLADAYTMIDRGHD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC AAVLFERLLSLRNDLGLLAEEYHPRHRRQLGNFPQAFSHVGLINTAYNLRRINGPAQQRA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHHH DRSASPHATHTSWTGTAGEQHRERSID CCCCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure SKPIEEYGFIGNMLSGALVARDGSMDWLCLPRFDSDACFAALLGASKHGYWQISPAGES CCCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCC NRSSRRYLPHAPVLETTFETEGGIVTLVDFMPLSNDPERVDVVRLVQGVSGKVRMRMELA CCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEE LRFGYGKTIPWVRRRDYGIHAVAGPDAVELATPVTLRGEDMRTVAEFEVGEGDVIPFTLA EEECCCCCCCCHHCCCCCEEEECCCCCCHHCCCEEECCCCCHHHHHEECCCCCEEEEEEE YHPLHREPHFIDDGRKRLEHTLAWWREWTRICQLSELEEPGWNDAVERSLITLKALSYQP ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECC SGGIVAALTTSLPEELGGVRNWDYRYCWIRDATLTLYAFMNAGCFDEAGAFREWMLRAAA CCCEEEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHC GAPDQMQIMYGIEGERRLTEIELPWLPGYENSLPVRIGNGAHEQIQVDVFGELMDTLYTA CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHH RKSQLGPHQEAWRFQQAILSRLESLWRGPDQGIWEVRGSPKHFVYSKMMAWVAFDRAIKA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VEQFGFPGPVGKWRTLRDEIHREVLARGYDKERNTFVQHYDGVGLDASLLLMAEVGFLPP HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCC DDPRFRGTVEAIERDLMEDGLVLRYRVGETKDGLAGEEGTFLVCSFWLADAYTMIDRGHD CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCC AAVLFERLLSLRNDLGLLAEEYHPRHRRQLGNFPQAFSHVGLINTAYNLRRINGPAQQRA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHHH DRSASPHATHTSWTGTAGEQHRERSID CCCCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA