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The map label for this gene is ybeQ [H]

Identifier: 82703407

GI number: 82703407

Start: 2605073

End: 2605738

Strand: Direct

Name: ybeQ [H]

Synonym: Nmul_A2289

Alternate gene names: 82703407

Gene position: 2605073-2605738 (Clockwise)

Preceding gene: 82703406

Following gene: 82703408

Centisome position: 81.81

GC content: 53.9

Gene sequence:

>666_bases
ATGAAAATTCTTTTTGTTACATTGCTCGCGCTGCCAATGCTCATGCTTGCCGGGTGTGGTCAGAAAACAGCGAAGGACGC
GGAGAAACCGGGTGGGCAGCAGGCGCAACTGCCGGATGAGTTTACTTCCGAGAAGCAAATGCCATCAGTGCTGGAAGAAA
GCCTCAGCCCGGAAGAGAAGTCTGCAATATTGAAAGAAATCATGCCGGCCGGGTCTGAGAGCGATTCCACACCCGAGGAA
AAATTCCTGCAGTTGAAAAAAGACGCGGAGGCTGGCGATCCCAAAGCCCAGACCGGCCTCGGCGTTATGTACTATACGGG
TGAAGCGATATCCAAGGATGCTTCGGGCAAAATCCTGAGTAATGACCCCGCTACCGCCGCCGCCTGGTTTCATCGCGCAG
CTGAGCAGGGCTATGCGGATGCGCAATTCAACCTGGGGTTGCTGTATGCGAACGGCGAGGGGGTTCCTAAAGATTCCGTC
AAGGCGTTCGGGCTGTTTCAAAAAGCGGCTGAACAGGGCAATGTTGACGCGCAAAATAACGTGGGGGTGATGTATTATTC
GGGTGAAGGCGTGCCTAGAGACGAAGCCAAGGCGAAAGAATGGTTCAAGAAAGCCGCGGCCCAGGGTAATGCCGATGCCC
AGGCAAACCTGGATGTAATGAAATAA

Upstream 100 bases:

>100_bases
CGACGCACCCGGTCGAATTCGATATGTACTACAGCTTGTGAGCACTGTTTCTCACGCTCGGACCGCTCATGCTGTTTCAT
TGATCAGGACATAATATCCG

Downstream 100 bases:

>100_bases
GAGCTTGGCTGTTTGTTTTGAAAATCGGGCATCTCCGTAATGCAAGGGCCGTATTACGGTGTGTTACCACAGAGGGTGGT
TATTCGTCATTATATCGGCA

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKILFVTLLALPMLMLAGCGQKTAKDAEKPGGQQAQLPDEFTSEKQMPSVLEESLSPEEKSAILKEIMPAGSESDSTPEE
KFLQLKKDAEAGDPKAQTGLGVMYYTGEAISKDASGKILSNDPATAAAWFHRAAEQGYADAQFNLGLLYANGEGVPKDSV
KAFGLFQKAAEQGNVDAQNNVGVMYYSGEGVPRDEAKAKEWFKKAAAQGNADAQANLDVMK

Sequences:

>Translated_221_residues
MKILFVTLLALPMLMLAGCGQKTAKDAEKPGGQQAQLPDEFTSEKQMPSVLEESLSPEEKSAILKEIMPAGSESDSTPEE
KFLQLKKDAEAGDPKAQTGLGVMYYTGEAISKDASGKILSNDPATAAAWFHRAAEQGYADAQFNLGLLYANGEGVPKDSV
KAFGLFQKAAEQGNVDAQNNVGVMYYSGEGVPRDEAKAKEWFKKAAAQGNADAQANLDVMK
>Mature_221_residues
MKILFVTLLALPMLMLAGCGQKTAKDAEKPGGQQAQLPDEFTSEKQMPSVLEESLSPEEKSAILKEIMPAGSESDSTPEE
KFLQLKKDAEAGDPKAQTGLGVMYYTGEAISKDASGKILSNDPATAAAWFHRAAEQGYADAQFNLGLLYANGEGVPKDSV
KAFGLFQKAAEQGNVDAQNNVGVMYYSGEGVPRDEAKAKEWFKKAAAQGNADAQANLDVMK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=214, Percent_Identity=32.2429906542056, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI151301150, Length=123, Percent_Identity=40.650406504065, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI87081769, Length=132, Percent_Identity=40.9090909090909, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786867, Length=130, Percent_Identity=33.8461538461538, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17563256, Length=130, Percent_Identity=36.1538461538462, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI21355295, Length=181, Percent_Identity=34.2541436464088, Blast_Score=87, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 23599; Mature: 23599

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFVTLLALPMLMLAGCGQKTAKDAEKPGGQQAQLPDEFTSEKQMPSVLEESLSPEEK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
SAILKEIMPAGSESDSTPEEKFLQLKKDAEAGDPKAQTGLGVMYYTGEAISKDASGKILS
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEEEECHHHCCCCCCCEEC
NDPATAAAWFHRAAEQGYADAQFNLGLLYANGEGVPKDSVKAFGLFQKAAEQGNVDAQNN
CCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
VGVMYYSGEGVPRDEAKAKEWFKKAAAQGNADAQANLDVMK
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKILFVTLLALPMLMLAGCGQKTAKDAEKPGGQQAQLPDEFTSEKQMPSVLEESLSPEEK
CHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
SAILKEIMPAGSESDSTPEEKFLQLKKDAEAGDPKAQTGLGVMYYTGEAISKDASGKILS
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEEEECHHHCCCCCCCEEC
NDPATAAAWFHRAAEQGYADAQFNLGLLYANGEGVPKDSVKAFGLFQKAAEQGNVDAQNN
CCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
VGVMYYSGEGVPRDEAKAKEWFKKAAAQGNADAQANLDVMK
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]