| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82703064
Identifier: 82703064
GI number: 82703064
Start: 2235112
End: 2235915
Strand: Reverse
Name: 82703064
Synonym: Nmul_A1943
Alternate gene names: NA
Gene position: 2235915-2235112 (Counterclockwise)
Preceding gene: 82703068
Following gene: 82703062
Centisome position: 70.22
GC content: 52.61
Gene sequence:
>804_bases ATGACCTATGTTTATCCCGTTATTTCGCGTCGTGCCGGCGGTGTGTCGATCGGAATCAATCTTAATCCGAACAATGCATG TAACTGGCGTTGCATCTACTGTCAGGTGCCGAATCTCTCGCGAGGCACTGCCCCCGCGATTGACCTGGCAAAACTTGAAG CCGAGTTGCGGGCTTTGTTGCACGAAATCGTATATGGCGATTTCATGCAAAGACAGGTACCTGCTGAGGCAAGACATCTC CATGATATCGCTTTATCCGGCAATGGCGAGTCGACCAGCGCCAGGGAATTCGAGCAGGTCATCGAACTGCTCGGACGGGT AAAAGCCGATTTCGAGCTGCCCGAAGCGCTTAAGCTGGTATTGATCACAAATGGCAGTCTGATAGATCGCGACAGTGTCC AGCGCGGGTTGAGCCGGATGGCAACCCTCAATGGCGAAGTATGGTTCAAGCTGGACAGCGTTACCCGTGAAGGAAGGCAG CTGATCAATAACACGCGCATGAGTTTGAAAAAGATGCGCAGGAATCTGCAACTGTCCGCATCCCTGTGCCCTACATGGTT GCAGACCTGTGTATTTCAGATCGACGGAATGCCACCTTCCAGAAATGAATCTGAAGCGTATTTGAGATTTATCGAGGAAT TTCTGAGCGAGGGGGGAGCACTCGAAGGGGTGCTTCTGTACGGTCTTGCGCGTCCATCCTTGCAGCCGGAAGCCTCTCGG CTGACGAAGATCAGGCAGGAGTGGATGGAGGCATTTTCGGAACAAATAAGACGCCGGGGACTCGCTGTAAAGCTGAATCC ATAG
Upstream 100 bases:
>100_bases GAATTCCAGCCTGCGTGTAATCAACATTATCGGGATTGTAGCATTGCAGCAAATTTCCAAACGATTGGATGTAGCAGATC ATAGCCGCGATATAACCGGG
Downstream 100 bases:
>100_bases CTGATTTCTCCTTCCTGATTCTCCGATGAAGCTTGAGCAGTGATCTGGACAGGTCTCCGGTATTGTCCCTACTGCTTGGC CTTGGAGGCTTTCTTCAGAC
Product: radical SAM family protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTYVYPVISRRAGGVSIGINLNPNNACNWRCIYCQVPNLSRGTAPAIDLAKLEAELRALLHEIVYGDFMQRQVPAEARHL HDIALSGNGESTSAREFEQVIELLGRVKADFELPEALKLVLITNGSLIDRDSVQRGLSRMATLNGEVWFKLDSVTREGRQ LINNTRMSLKKMRRNLQLSASLCPTWLQTCVFQIDGMPPSRNESEAYLRFIEEFLSEGGALEGVLLYGLARPSLQPEASR LTKIRQEWMEAFSEQIRRRGLAVKLNP
Sequences:
>Translated_267_residues MTYVYPVISRRAGGVSIGINLNPNNACNWRCIYCQVPNLSRGTAPAIDLAKLEAELRALLHEIVYGDFMQRQVPAEARHL HDIALSGNGESTSAREFEQVIELLGRVKADFELPEALKLVLITNGSLIDRDSVQRGLSRMATLNGEVWFKLDSVTREGRQ LINNTRMSLKKMRRNLQLSASLCPTWLQTCVFQIDGMPPSRNESEAYLRFIEEFLSEGGALEGVLLYGLARPSLQPEASR LTKIRQEWMEAFSEQIRRRGLAVKLNP >Mature_266_residues TYVYPVISRRAGGVSIGINLNPNNACNWRCIYCQVPNLSRGTAPAIDLAKLEAELRALLHEIVYGDFMQRQVPAEARHLH DIALSGNGESTSAREFEQVIELLGRVKADFELPEALKLVLITNGSLIDRDSVQRGLSRMATLNGEVWFKLDSVTREGRQL INNTRMSLKKMRRNLQLSASLCPTWLQTCVFQIDGMPPSRNESEAYLRFIEEFLSEGGALEGVLLYGLARPSLQPEASRL TKIRQEWMEAFSEQIRRRGLAVKLNP
Specific function: Unknown
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30087; Mature: 29956
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYVYPVISRRAGGVSIGINLNPNNACNWRCIYCQVPNLSRGTAPAIDLAKLEAELRALL CCEECHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HEIVYGDFMQRQVPAEARHLHDIALSGNGESTSAREFEQVIELLGRVKADFELPEALKLV HHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE LITNGSLIDRDSVQRGLSRMATLNGEVWFKLDSVTREGRQLINNTRMSLKKMRRNLQLSA EEECCCEECHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLCPTWLQTCVFQIDGMPPSRNESEAYLRFIEEFLSEGGALEGVLLYGLARPSLQPEASR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHH LTKIRQEWMEAFSEQIRRRGLAVKLNP HHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure TYVYPVISRRAGGVSIGINLNPNNACNWRCIYCQVPNLSRGTAPAIDLAKLEAELRALL CEECHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HEIVYGDFMQRQVPAEARHLHDIALSGNGESTSAREFEQVIELLGRVKADFELPEALKLV HHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE LITNGSLIDRDSVQRGLSRMATLNGEVWFKLDSVTREGRQLINNTRMSLKKMRRNLQLSA EEECCCEECHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLCPTWLQTCVFQIDGMPPSRNESEAYLRFIEEFLSEGGALEGVLLYGLARPSLQPEASR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHH LTKIRQEWMEAFSEQIRRRGLAVKLNP HHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA