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The map label for this gene is recO

Identifier: 82702880

GI number: 82702880

Start: 2008752

End: 2009480

Strand: Direct

Name: recO

Synonym: Nmul_A1757

Alternate gene names: 82702880

Gene position: 2008752-2009480 (Clockwise)

Preceding gene: 82702879

Following gene: 82702882

Centisome position: 63.08

GC content: 50.34

Gene sequence:

>729_bases
ATGAACGTAGATAAACAACGGCAGGAAGCACAACCCGCTTTTGTGTTGCATAGCTATCCTTATCTTGAAACCAGCCTTAT
CGTGGAAGTTTTCACGCAAAATTCCGGGCGCATTGCCGTGGTTGCGAAAGGCGCCAAGCGGCCGACATCTCCACTACGGG
GATTGCTGCGCGCATTCCAGCCTCTCCTGCTGAGCTGGGGAGGAAAGTCCGAATTACGCACTTTGCATAAGGCGGAATGG
CAAGGTGGACAATTACCCTTACAGGGAACTGCCCTGATATGCGGATTTTATCTCAATGAACTTTTGATACGGCTATTGCA
CCGCAATGATCCGCACGAGCGATTATTTGCCTGCTATCAGGAGGCCTTGTCCGATCTGAGTACGGCAAGTGATTATATTC
CCATACTGCGCCGCTTCGAGCAGCGTCTCCTGCAGGAAATGGGTTATGCCTTGACGCTCGATCACGATGTTTCATCAGGA
AAACCGATTAAACCAACCCAGATGTACTGCTACGAAATCGAGCGCGGCCCCATTGCGTCGAGCAACGGCAGCTGCCCCTT
TAATCTCGAGTTAAGTGGAAAAACACTGCTGGATATGTATCAGGGAGACTATTTAGCGCCATTGACCCGTCTGCAGAGCA
GGATCCTGATGCGCCACCTTCTCAGCCACTATCTGGGAGATAAGCCATTACATACACGCCAGTTACTGAAAGAGTTTCAG
CAATTGTAA

Upstream 100 bases:

>100_bases
CAGCGCGGAGGGTGGAGCAGTGCCTTCCGAAGGAAGCTGCGACCCGGAGCGTGCGGAAAACCGCACAAGCGAAGATCGTA
GCAGGGGCGCTCGCTAAAAC

Downstream 100 bases:

>100_bases
TGCTCATCCCTGAGGAACAGGACGAAGTCAGCAGGCGACAGAGGGTAAACCATCCTCACGGAAGAGTGCGGCGCTGTGTT
CAGCGTAGAATCCCCAGCCT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNVDKQRQEAQPAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQPLLLSWGGKSELRTLHKAEW
QGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQEALSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSG
KPIKPTQMYCYEIERGPIASSNGSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQ
QL

Sequences:

>Translated_242_residues
MNVDKQRQEAQPAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQPLLLSWGGKSELRTLHKAEW
QGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQEALSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSG
KPIKPTQMYCYEIERGPIASSNGSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQ
QL
>Mature_242_residues
MNVDKQRQEAQPAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQPLLLSWGGKSELRTLHKAEW
QGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQEALSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSG
KPIKPTQMYCYEIERGPIASSNGSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQ
QL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=230, Percent_Identity=40.4347826086956, Blast_Score=154, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_NITMU (Q2Y867)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_412446.1
- ProteinModelPortal:   Q2Y867
- STRING:   Q2Y867
- GeneID:   3783957
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1757
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- PhylomeDB:   Q2Y867
- ProtClustDB:   PRK00085
- BioCyc:   NMUL323848:NMUL_A1757-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27610; Mature: 27610

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVDKQRQEAQPAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQ
CCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
PLLLSWGGKSELRTLHKAEWQGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQ
HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EALSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSGKPIKPTQMYCYEIERGPIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHEEEEECCCCCCC
SNGSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQ
CCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QL
CC
>Mature Secondary Structure
MNVDKQRQEAQPAFVLHSYPYLETSLIVEVFTQNSGRIAVVAKGAKRPTSPLRGLLRAFQ
CCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
PLLLSWGGKSELRTLHKAEWQGGQLPLQGTALICGFYLNELLIRLLHRNDPHERLFACYQ
HHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EALSDLSTASDYIPILRRFEQRLLQEMGYALTLDHDVSSGKPIKPTQMYCYEIERGPIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHEEEEECCCCCCC
SNGSCPFNLELSGKTLLDMYQGDYLAPLTRLQSRILMRHLLSHYLGDKPLHTRQLLKEFQ
CCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA