| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is rseA [C]
Identifier: 82702870
GI number: 82702870
Start: 1999999
End: 2000565
Strand: Direct
Name: rseA [C]
Synonym: Nmul_A1747
Alternate gene names: 82702870
Gene position: 1999999-2000565 (Clockwise)
Preceding gene: 82702869
Following gene: 82702871
Centisome position: 62.81
GC content: 55.2
Gene sequence:
>567_bases ATGCAAGAAAAAATATCGGCATTGATGGATGGTGAACTGGACGCGGGCGATGCCTCGGCAATGATCGAGCAATTCAAGAA CGCGGAGGAATTACGGGAATACTGGATTGCCTACCACCTGATCAGCGATGCATTGGGTCAGTCGGAGGTCAAACCATTAG ACATTACGCGACGAGTTAACGCAAGACTGGTAGCGGAACCTGCGGTATTCGCAGTGTCAAGCACAACATTGCCTTATCCG GCACCGAAGCGCAGGCCAAGAGCCTACGCTGCTGCAGCCTCCATCGCAGCAGCGATGGTGGGTGGATGGATAATTCTGCA AACGACGCAAGAGCCGGATCTTCTGAGGCAGAATCTGGCCGATAACAGGACGTCGCCCTCGACTTCTGCAGCCACCACTC TCGCACCCGTTGCCACTTATCCGGCAATTCCCGCCAAAGCTTCCATCGCCGCGTCCGAATCTGCGCAAATCAACGACTAT CTCCTGGCGCATCAGCAATTCTCGCCTAGCACCACCATGCACGGAGCAATCCCCTTCATGCGTACAGCTGCGGAAAGCGC GCGATAA
Upstream 100 bases:
>100_bases CCTATCGGCACGGTCCGTTCGCGAATATTTCGTGCACGGGAAGCAATAGCGGAAAAACTGCGCCCCTTGCTGGGGACTGG TAAAGATAAGAGGTGGTAAT
Downstream 100 bases:
>100_bases CGTTCCCAGATGACACAGGTTTCACTGTCTTCCCTGCTGCTGACAGTTATCGTTCAATCCGCATTTGCGCAGAATCCCTC CAGTTCATCCCCCTCATCCC
Product: anti sigma-E protein RseA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MQEKISALMDGELDAGDASAMIEQFKNAEELREYWIAYHLISDALGQSEVKPLDITRRVNARLVAEPAVFAVSSTTLPYP APKRRPRAYAAAASIAAAMVGGWIILQTTQEPDLLRQNLADNRTSPSTSAATTLAPVATYPAIPAKASIAASESAQINDY LLAHQQFSPSTTMHGAIPFMRTAAESAR
Sequences:
>Translated_188_residues MQEKISALMDGELDAGDASAMIEQFKNAEELREYWIAYHLISDALGQSEVKPLDITRRVNARLVAEPAVFAVSSTTLPYP APKRRPRAYAAAASIAAAMVGGWIILQTTQEPDLLRQNLADNRTSPSTSAATTLAPVATYPAIPAKASIAASESAQINDY LLAHQQFSPSTTMHGAIPFMRTAAESAR >Mature_188_residues MQEKISALMDGELDAGDASAMIEQFKNAEELREYWIAYHLISDALGQSEVKPLDITRRVNARLVAEPAVFAVSSTTLPYP APKRRPRAYAAAASIAAAMVGGWIILQTTQEPDLLRQNLADNRTSPSTSAATTLAPVATYPAIPAKASIAASESAQINDY LLAHQQFSPSTTMHGAIPFMRTAAESAR
Specific function: Negative Regulator Of Rpoe. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20201; Mature: 20201
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKISALMDGELDAGDASAMIEQFKNAEELREYWIAYHLISDALGQSEVKPLDITRRVN CCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC ARLVAEPAVFAVSSTTLPYPAPKRRPRAYAAAASIAAAMVGGWIILQTTQEPDLLRQNLA CEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHH DNRTSPSTSAATTLAPVATYPAIPAKASIAASESAQINDYLLAHQQFSPSTTMHGAIPFM CCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH RTAAESAR HHHHHCCC >Mature Secondary Structure MQEKISALMDGELDAGDASAMIEQFKNAEELREYWIAYHLISDALGQSEVKPLDITRRVN CCHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC ARLVAEPAVFAVSSTTLPYPAPKRRPRAYAAAASIAAAMVGGWIILQTTQEPDLLRQNLA CEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHH DNRTSPSTSAATTLAPVATYPAIPAKASIAASESAQINDYLLAHQQFSPSTTMHGAIPFM CCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH RTAAESAR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA