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The map label for this gene is hupE [H]

Identifier: 82702793

GI number: 82702793

Start: 1908009

End: 1909013

Strand: Direct

Name: hupE [H]

Synonym: Nmul_A1669

Alternate gene names: 82702793

Gene position: 1908009-1909013 (Clockwise)

Preceding gene: 82702792

Following gene: 82702794

Centisome position: 59.92

GC content: 61.49

Gene sequence:

>1005_bases
ATGGAGGATAGGCACGTCAGCTTGGCCCATGGCAATGGCGGCAGTTACATGCGGGAGCTGATCGAAACCGTGTTTGCGCG
CCATCTTTCCAACCCCTTGCTCGATGTACAGGCGGATGCCGCGGCCTTACCTCCCATGGATGGGGTGATAATGATAACCA
CGGATGGCTTTACTGTGCAGCCGCTGGAGTTCCCGGGGGGCACGATCGGTTCCCTGGCGGTGCACGGAACCGTAAACGAC
CTGGCCGTATCCGGCGCCCGGCCCTGCTATCTCACGCTCAACGCCTTTATTGAGGAAGGCTTCGATATGGCGCAGTTGGA
ACGCATTGTGGCGAGCCTGGCCAGTGCGGCACGGGAGACGAATGTCGCTGTGGTAGCGGGTGACACCAAGGTTCTTCCGC
GCGGGCAAGGGGGCGGGCTGTATCTTGCCGCCACCGGAGTAGGTGTGAGGCCACCAAATCTGGAGCTTGGCCTCGACCGG
GTAAAACCGGGAGACCTCATCCTCGTAAGCGGTCCGGTAGGCGATCATGGCGTTGCCGTTATGCTGGCCCGCGAGCAATT
TGGCTTGAGCGGCGAATTGCTGTCGGACGCAGCCAGTGTGCTTCCCTTGACGCAGGCATTAGTACCGTTGCCGGGCCTGC
ATTTCATGCGCGACCCCACCCGGGGCGGGCTTGCTACCGTTCTGCATGAAATCTGCCGCGCCACAGGACTGGAAACGCGG
CTCAACCAGGCGGCGGTTCCGGTACGCGATCAGGTAGCGTCGGTATGCGAAATGCTGGGGTATGATCCTTTTTACCTGGC
TTGCGAAGGGCGGGTGGTGGCGGTGGTGGAATCCCCTCAGGCGAGCGAAGCGCTTGCCCGATTGCAGGCGCTGCCGCAGG
GCTGCCAGGCCGCGATTATTGGAAGTGTGAACCATGGCCGTCCGCACGTCGTACTTGAAACCGAACTGGGGGGAGAGCGT
ATTCTGGATGAACTGGAGGATGATCCGCTCCCCCGGATATGCTAG

Upstream 100 bases:

>100_bases
GGGTTTGAAGCATATTTGCCGGAAAGAACCCCTTGCAATGATGGAGGCATTGCGCTGGGTCAATTGGTCGAAGCAGCTGC
GGGCCTCGAAGCAGGTGCGC

Downstream 100 bases:

>100_bases
AAATGAATGATGCAGCCCCCTGATCTTCCCGATATCGAACAGCAGATCGCAATCATATGCCAACGGCACGGCTGTGAGCC
CCATCGCCTGCTTCAGATCC

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MEDRHVSLAHGNGGSYMRELIETVFARHLSNPLLDVQADAAALPPMDGVIMITTDGFTVQPLEFPGGTIGSLAVHGTVND
LAVSGARPCYLTLNAFIEEGFDMAQLERIVASLASAARETNVAVVAGDTKVLPRGQGGGLYLAATGVGVRPPNLELGLDR
VKPGDLILVSGPVGDHGVAVMLAREQFGLSGELLSDAASVLPLTQALVPLPGLHFMRDPTRGGLATVLHEICRATGLETR
LNQAAVPVRDQVASVCEMLGYDPFYLACEGRVVAVVESPQASEALARLQALPQGCQAAIIGSVNHGRPHVVLETELGGER
ILDELEDDPLPRIC

Sequences:

>Translated_334_residues
MEDRHVSLAHGNGGSYMRELIETVFARHLSNPLLDVQADAAALPPMDGVIMITTDGFTVQPLEFPGGTIGSLAVHGTVND
LAVSGARPCYLTLNAFIEEGFDMAQLERIVASLASAARETNVAVVAGDTKVLPRGQGGGLYLAATGVGVRPPNLELGLDR
VKPGDLILVSGPVGDHGVAVMLAREQFGLSGELLSDAASVLPLTQALVPLPGLHFMRDPTRGGLATVLHEICRATGLETR
LNQAAVPVRDQVASVCEMLGYDPFYLACEGRVVAVVESPQASEALARLQALPQGCQAAIIGSVNHGRPHVVLETELGGER
ILDELEDDPLPRIC
>Mature_334_residues
MEDRHVSLAHGNGGSYMRELIETVFARHLSNPLLDVQADAAALPPMDGVIMITTDGFTVQPLEFPGGTIGSLAVHGTVND
LAVSGARPCYLTLNAFIEEGFDMAQLERIVASLASAARETNVAVVAGDTKVLPRGQGGGLYLAATGVGVRPPNLELGLDR
VKPGDLILVSGPVGDHGVAVMLAREQFGLSGELLSDAASVLPLTQALVPLPGLHFMRDPTRGGLATVLHEICRATGLETR
LNQAAVPVRDQVASVCEMLGYDPFYLACEGRVVAVVESPQASEALARLQALPQGCQAAIIGSVNHGRPHVVLETELGGER
ILDELEDDPLPRIC

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=336, Percent_Identity=43.75, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 35109; Mature: 35109

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRHVSLAHGNGGSYMRELIETVFARHLSNPLLDVQADAAALPPMDGVIMITTDGFTVQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCEEE
PLEFPGGTIGSLAVHGTVNDLAVSGARPCYLTLNAFIEEGFDMAQLERIVASLASAARET
EEECCCCCEEEEEEECCHHHHHHCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NVAVVAGDTKVLPRGQGGGLYLAATGVGVRPPNLELGLDRVKPGDLILVSGPVGDHGVAV
CEEEEECCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
MLAREQFGLSGELLSDAASVLPLTQALVPLPGLHFMRDPTRGGLATVLHEICRATGLETR
EEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHH
LNQAAVPVRDQVASVCEMLGYDPFYLACEGRVVAVVESPQASEALARLQALPQGCQAAII
HHHCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE
GSVNHGRPHVVLETELGGERILDELEDDPLPRIC
ECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEDRHVSLAHGNGGSYMRELIETVFARHLSNPLLDVQADAAALPPMDGVIMITTDGFTVQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCEEE
PLEFPGGTIGSLAVHGTVNDLAVSGARPCYLTLNAFIEEGFDMAQLERIVASLASAARET
EEECCCCCEEEEEEECCHHHHHHCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHC
NVAVVAGDTKVLPRGQGGGLYLAATGVGVRPPNLELGLDRVKPGDLILVSGPVGDHGVAV
CEEEEECCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
MLAREQFGLSGELLSDAASVLPLTQALVPLPGLHFMRDPTRGGLATVLHEICRATGLETR
EEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHH
LNQAAVPVRDQVASVCEMLGYDPFYLACEGRVVAVVESPQASEALARLQALPQGCQAAII
HHHCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE
GSVNHGRPHVVLETELGGERILDELEDDPLPRIC
ECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]