Click here to switch to the map view.

The map label for this gene is flhF [H]

Identifier: 82702440

GI number: 82702440

Start: 1502699

End: 1504411

Strand: Direct

Name: flhF [H]

Synonym: Nmul_A1311

Alternate gene names: 82702440

Gene position: 1502699-1504411 (Clockwise)

Preceding gene: 82702439

Following gene: 82702441

Centisome position: 47.19

GC content: 56.45

Gene sequence:

>1713_bases
ATGACTATCAAACGATTTTTTGCCAAAACAACCAGCGAAGCATTGCGCATGGTACGCGATGAGCTCGGAGCCGACGGGGT
GATTCTGTCGAATCGAGCGGTAGACAATGGTGTCGAGATATTGGCCTTGAGCAATAGCGCTATGTCCGCGTTGCTCCCCC
CGGCGGAATGCCAGAAAGAAGATGGGCAGGAGCAAAGGCTGCGGGAAGAGAGCAAGAACGGGTTCTCGCCCGACGTGTCG
GTAGCAATACTCCCGGTTCCCAAACCTGCGGTTCCCAAAAGTATGCCCGAGAATCCTGCTGTACCTCCTGCTAGAGGTGC
GGAGCAGACAGCAAGGACGGCAAGAATCGAAAAAAATGCTGAAGATGCGCCCGAGCGTGATTTGACTCCTTTGCCGCGCA
AGAAGGCGCAAGAGACAGATCACGCTGCCAGGACCAACAAAAAAGCCGTTCCGCAAATTTCCAGCAAACCGCGTCGCGCA
ACTACGGGACGCGTGCAGTCCACGAAGAGTGGAGAAGGGTCGGCGAAGAAAAGCAGCAGAGGAACAACCCCCCGTGAATC
GAGCGCCATGGCGGGGGAAACGAGGGTGTCAGATTTCCGGAGCTGGCGGAAACGATTACAGAATACGCGCAACTCATCGC
CAGCAATGAATCCGGAAATTGCAATTTCCCGCAGGCCCCGACGGCTTGCGCTCGATTCTCTTCAAGTCGCGGATAAGGTT
GCGGCCAGTGTTCTAAAGGAAGTCCGTTTCATGCATTCGACACTGGAGCAGCAACTCGCCTCGCTAAGCCGGAACGAGCA
GGAGAGACGCGATCCGGTGCGCGGGCAATTATTTCGCCAGCTGCTGGCAGCGGGACTCCATGATGCTTCCGTACAGGCGC
TGCTGGATCAATTGCCAGAAAAGCTGGACGCAAGCGCAGCCATGAACTGGGTAAGAACGGCGCTGACAGGCAATCTTCAG
ACTATCGGGAACGAGGACGAAATTCTGGAGAAGGGAGGTGTTTATGCTCTGGTAGGGCCGACCGGTGTGGGTAAGACGAC
TACTACCGCGAAGCTCGCAGCGCGTTGTGTTGTCCGCCATGGAGCAAGCAAGGTCGCTTTGCTGACGACCGACAGCTACC
GCATAGGCGGACATGAGCAGTTACGGATTTATGGAAAGATTCTGGGGGTCAGCATACATGCGGTGAGGGATACGCAGGAC
TTGGCCCTCGTACTGAATGAATTGCGCGGCAAGCATATTGTGCTGATCGACACGGTTGGCGTAGGGCAGCGCGATCAGAT
GGTAGCCGAACAGGTTGCCATGCTGAGTGGCTGCGGCAGTGAAATCAAGCGCCTGCTGCTGCTCAATGCCGCTTCGAGTT
GGCATACGCTGGATGAAGTTGCAGAGGCCTACTGGGGTGATGGTCTGGCGGGCGCCATCATCAGCAAGCTGGATGAAGCG
GTAGTAACGGGCTGTGCGCTCGATATAGCCATGCGCCACAACTTGCCTCTCTACTATGTTGCCAATGGCCAGCGGGTCCC
CGAGGATATCGAGCTTGCGGATGCCGAATCCCTGGTAAACCGCATGTTCGACGATCTCTCGCAGTTCGCTCATTTTCCTC
AGTTCCAGGACGCCGCGTCTTTTACCGCTCTCGATCATTCATGTTCGATAGCCGGAGCAAGTCGCGAGGATGGCGGAATC
GGGCCGGATACGAGCGAGGTGTTCCTTGACTGA

Upstream 100 bases:

>100_bases
GTTTTCTGCGCCGTGCCGTTCCTCAACTGAAAATACTGTCGCATGCGGAAGTACCCGATTCAAGCAATATTAAAGTCACT
TCGATTCTTGGAGCCAGAGC

Downstream 100 bases:

>100_bases
ACCCATTCATGACCAGGCAGAGGGCCTTCGCCGATTGCTGGTTCAGAATTTCCTGCGCATTGTCACACTCACATCCGGTG
GTACGGGTACGGGAAATACC

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MTIKRFFAKTTSEALRMVRDELGADGVILSNRAVDNGVEILALSNSAMSALLPPAECQKEDGQEQRLREESKNGFSPDVS
VAILPVPKPAVPKSMPENPAVPPARGAEQTARTARIEKNAEDAPERDLTPLPRKKAQETDHAARTNKKAVPQISSKPRRA
TTGRVQSTKSGEGSAKKSSRGTTPRESSAMAGETRVSDFRSWRKRLQNTRNSSPAMNPEIAISRRPRRLALDSLQVADKV
AASVLKEVRFMHSTLEQQLASLSRNEQERRDPVRGQLFRQLLAAGLHDASVQALLDQLPEKLDASAAMNWVRTALTGNLQ
TIGNEDEILEKGGVYALVGPTGVGKTTTTAKLAARCVVRHGASKVALLTTDSYRIGGHEQLRIYGKILGVSIHAVRDTQD
LALVLNELRGKHIVLIDTVGVGQRDQMVAEQVAMLSGCGSEIKRLLLLNAASSWHTLDEVAEAYWGDGLAGAIISKLDEA
VVTGCALDIAMRHNLPLYYVANGQRVPEDIELADAESLVNRMFDDLSQFAHFPQFQDAASFTALDHSCSIAGASREDGGI
GPDTSEVFLD

Sequences:

>Translated_570_residues
MTIKRFFAKTTSEALRMVRDELGADGVILSNRAVDNGVEILALSNSAMSALLPPAECQKEDGQEQRLREESKNGFSPDVS
VAILPVPKPAVPKSMPENPAVPPARGAEQTARTARIEKNAEDAPERDLTPLPRKKAQETDHAARTNKKAVPQISSKPRRA
TTGRVQSTKSGEGSAKKSSRGTTPRESSAMAGETRVSDFRSWRKRLQNTRNSSPAMNPEIAISRRPRRLALDSLQVADKV
AASVLKEVRFMHSTLEQQLASLSRNEQERRDPVRGQLFRQLLAAGLHDASVQALLDQLPEKLDASAAMNWVRTALTGNLQ
TIGNEDEILEKGGVYALVGPTGVGKTTTTAKLAARCVVRHGASKVALLTTDSYRIGGHEQLRIYGKILGVSIHAVRDTQD
LALVLNELRGKHIVLIDTVGVGQRDQMVAEQVAMLSGCGSEIKRLLLLNAASSWHTLDEVAEAYWGDGLAGAIISKLDEA
VVTGCALDIAMRHNLPLYYVANGQRVPEDIELADAESLVNRMFDDLSQFAHFPQFQDAASFTALDHSCSIAGASREDGGI
GPDTSEVFLD
>Mature_569_residues
TIKRFFAKTTSEALRMVRDELGADGVILSNRAVDNGVEILALSNSAMSALLPPAECQKEDGQEQRLREESKNGFSPDVSV
AILPVPKPAVPKSMPENPAVPPARGAEQTARTARIEKNAEDAPERDLTPLPRKKAQETDHAARTNKKAVPQISSKPRRAT
TGRVQSTKSGEGSAKKSSRGTTPRESSAMAGETRVSDFRSWRKRLQNTRNSSPAMNPEIAISRRPRRLALDSLQVADKVA
ASVLKEVRFMHSTLEQQLASLSRNEQERRDPVRGQLFRQLLAAGLHDASVQALLDQLPEKLDASAAMNWVRTALTGNLQT
IGNEDEILEKGGVYALVGPTGVGKTTTTAKLAARCVVRHGASKVALLTTDSYRIGGHEQLRIYGKILGVSIHAVRDTQDL
ALVLNELRGKHIVLIDTVGVGQRDQMVAEQVAMLSGCGSEIKRLLLLNAASSWHTLDEVAEAYWGDGLAGAIISKLDEAV
VTGCALDIAMRHNLPLYYVANGQRVPEDIELADAESLVNRMFDDLSQFAHFPQFQDAASFTALDHSCSIAGASREDGGIG
PDTSEVFLD

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=202, Percent_Identity=25.7425742574257, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 61768; Mature: 61636

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKRFFAKTTSEALRMVRDELGADGVILSNRAVDNGVEILALSNSAMSALLPPAECQKE
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCHHHHCCCCHHHHCC
DGQEQRLREESKNGFSPDVSVAILPVPKPAVPKSMPENPAVPPARGAEQTARTARIEKNA
CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
EDAPERDLTPLPRKKAQETDHAARTNKKAVPQISSKPRRATTGRVQSTKSGEGSAKKSSR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTTPRESSAMAGETRVSDFRSWRKRLQNTRNSSPAMNPEIAISRRPRRLALDSLQVADKV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
AASVLKEVRFMHSTLEQQLASLSRNEQERRDPVRGQLFRQLLAAGLHDASVQALLDQLPE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KLDASAAMNWVRTALTGNLQTIGNEDEILEKGGVYALVGPTGVGKTTTTAKLAARCVVRH
HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
GASKVALLTTDSYRIGGHEQLRIYGKILGVSIHAVRDTQDLALVLNELRGKHIVLIDTVG
CCCEEEEEEECCEEECCCHHHEEEEEEHHEEEEEECCHHHHHHHHHHHCCCEEEEEEECC
VGQRDQMVAEQVAMLSGCGSEIKRLLLLNAASSWHTLDEVAEAYWGDGLAGAIISKLDEA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VVTGCALDIAMRHNLPLYYVANGQRVPEDIELADAESLVNRMFDDLSQFAHFPQFQDAAS
HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FTALDHSCSIAGASREDGGIGPDTSEVFLD
HHHHCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TIKRFFAKTTSEALRMVRDELGADGVILSNRAVDNGVEILALSNSAMSALLPPAECQKE
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCHHHHCCCCHHHHCC
DGQEQRLREESKNGFSPDVSVAILPVPKPAVPKSMPENPAVPPARGAEQTARTARIEKNA
CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
EDAPERDLTPLPRKKAQETDHAARTNKKAVPQISSKPRRATTGRVQSTKSGEGSAKKSSR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTTPRESSAMAGETRVSDFRSWRKRLQNTRNSSPAMNPEIAISRRPRRLALDSLQVADKV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
AASVLKEVRFMHSTLEQQLASLSRNEQERRDPVRGQLFRQLLAAGLHDASVQALLDQLPE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KLDASAAMNWVRTALTGNLQTIGNEDEILEKGGVYALVGPTGVGKTTTTAKLAARCVVRH
HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
GASKVALLTTDSYRIGGHEQLRIYGKILGVSIHAVRDTQDLALVLNELRGKHIVLIDTVG
CCCEEEEEEECCEEECCCHHHEEEEEEHHEEEEEECCHHHHHHHHHHHCCCEEEEEEECC
VGQRDQMVAEQVAMLSGCGSEIKRLLLLNAASSWHTLDEVAEAYWGDGLAGAIISKLDEA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
VVTGCALDIAMRHNLPLYYVANGQRVPEDIELADAESLVNRMFDDLSQFAHFPQFQDAAS
HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FTALDHSCSIAGASREDGGIGPDTSEVFLD
HHHHCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9503621 [H]