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The map label for this gene is ureF

Identifier: 82702372

GI number: 82702372

Start: 1427835

End: 1428515

Strand: Direct

Name: ureF

Synonym: Nmul_A1243

Alternate gene names: 82702372

Gene position: 1427835-1428515 (Clockwise)

Preceding gene: 82702371

Following gene: 82702373

Centisome position: 44.84

GC content: 56.09

Gene sequence:

>681_bases
ATGAAAGAATACCGCGCCCTGCTGGCCCTGTTGCACCTTGCCAGCCCTTCGCTTCCGATCGGGGCTTATACGTATTCCCA
GGGCCTGGAATCGGCCATTGAGCAAGGATTGGTTCGAGATGAAACCTCCGCACGCGAGTGGCTCGTTGAAATGCTGGGAA
TTTTTACGGATTTCGAGTTGCCGATTCTGCAACGTCTGTTGAAGGCCTTTTCGGAGCGGGATGAGGCTGCGGTAAGCTTC
TGGACGGAATGCTTCGTTGCTTCCCGCGAGACCTCGGAGTTTCGTGCCGAAACGGTGCAGATGGGGTATTCACTGGCAAA
GTTGGTCATCGATCTCAAGCTCGGGGATGATTCGATGCGGGCAATCCTGGAAAACCAACAGGCGATTCCGCTCCCCACGG
CATTTGCATGTGCTGCCGAAGCGTTGGGTATCCCGCACGAAGAGAGCTTGCTGGGCATGCTGTTTTCAATGGCCGAGAAT
CAGGTGCTGGCCTGTGTCAAATCGGTTCCGCTGGGCCAGCTTTCGGGGCAGCGGTTGCTATTGTCCCTGCATCCCGTCAT
TGAAGCCTGCTCGATTCGCGCAAGCCAGCTTACGGATGATGAGTTGTCGAGCTGGGCTCCCGGCTTGTCGCTGCTGTCGA
TGCAACACGAGGTTCAATACAGCCGAATCTATCGATCGTAG

Upstream 100 bases:

>100_bases
ATCATGGGGAGTCGAGCCAGGGGCATGCCCATGGTCCGCTCGCTCCGATTCCGGTGCACCAGAAAATCCATCGTCCCTCC
GACATTCCTTCCCGGTAATA

Downstream 100 bases:

>100_bases
TTCTTGATGGGAACAGAAAATGAACAAACAATCTAATCCACTCCGTGTCGGAATCGGTGGTCCCGTAGGTTCCGGAAAAA
CGGCCTTGTGTGAAGCGCTC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKEYRALLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLGIFTDFELPILQRLLKAFSERDEAAVSF
WTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMRAILENQQAIPLPTAFACAAEALGIPHEESLLGMLFSMAEN
QVLACVKSVPLGQLSGQRLLLSLHPVIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS

Sequences:

>Translated_226_residues
MKEYRALLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLGIFTDFELPILQRLLKAFSERDEAAVSF
WTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMRAILENQQAIPLPTAFACAAEALGIPHEESLLGMLFSMAEN
QVLACVKSVPLGQLSGQRLLLSLHPVIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS
>Mature_226_residues
MKEYRALLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLGIFTDFELPILQRLLKAFSERDEAAVSF
WTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMRAILENQQAIPLPTAFACAAEALGIPHEESLLGMLFSMAEN
QVLACVKSVPLGQLSGQRLLLSLHPVIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_NITMU (Q2Y9M5)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411938.1
- STRING:   Q2Y9M5
- GeneID:   3786019
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1243
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK943177
- BioCyc:   NMUL323848:NMUL_A1243-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 25041; Mature: 25041

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYRALLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLGIFTDFEL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
PILQRLLKAFSERDEAAVSFWTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMR
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHH
AILENQQAIPLPTAFACAAEALGIPHEESLLGMLFSMAENQVLACVKSVPLGQLSGQRLL
HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSLHPVIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS
HHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEYRALLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLGIFTDFEL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
PILQRLLKAFSERDEAAVSFWTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMR
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHH
AILENQQAIPLPTAFACAAEALGIPHEESLLGMLFSMAENQVLACVKSVPLGQLSGQRLL
HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LSLHPVIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS
HHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA