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The map label for this gene is ccmH [H]

Identifier: 82702336

GI number: 82702336

Start: 1393202

End: 1393750

Strand: Reverse

Name: ccmH [H]

Synonym: Nmul_A1207

Alternate gene names: 82702336

Gene position: 1393750-1393202 (Counterclockwise)

Preceding gene: 82702337

Following gene: 82702335

Centisome position: 43.77

GC content: 54.1

Gene sequence:

>549_bases
ATGAGATTGAAACTTTTATCCCGGTCGTCTTTGGCGGCTTGTGGCAGCGGTAAAAACGATCAAGGCAACAATGGGGGCGG
CTTTGCGCTGTTAAAAGCGGCGCTGCTGCTCTGTCTGTTGCTTCTTGCCCCGTTTGCGGAGGCAAAGGAAGCTGCTCCTG
TTGCCGAAAATCCGGAAATAGAGAGACGCATGGTGGCGCTATCCGAAGACCTGCGATGTCTGGTCTGTCAGAATGAGACG
ATAGCCGCTTCGCGTGCCGACTTTGCCAACGACTTGCGGCGCGAAATCCGCGAACAGATGCAAGCCAACAAGAGTGACAA
GGAAATTGTCGACTTTCTGGTGGCGCGCTACGGCGATTTCGTGCTTTATCGTCCACCGATGAAAAGTACCACCCTGCTCC
TGTGGTTCGGTCCTTTCATCTTCCTTTTGACTGGCGCAGTCTTCCTGGTGTTTTATCTCAAGCGCCGTCGCAAACACATC
GAAGAACCCGCGCTATCCGAACAGCAACTCAAGCAGGCGGAAGCCTTGCTGAAGGAAGGCAAGGGGTGA

Upstream 100 bases:

>100_bases
TCATCGACAAGAATGGGGTAATTCGCTATAAGCAGATCGGTCCCGTAACAGTGGAAGCACTGCAGAATAAAATTCTGCCT
CTGGTGAGAGAATTACAAGG

Downstream 100 bases:

>100_bases
TAAACGCATGACTTCATTCTGGATTGTAGCCGGCATATTTATTGTCGGCGCCCTGCTGTTCGTGTTGCCTACATTGTGGA
GCAAGAAGGATCGCGAGGCC

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRLKLLSRSSLAACGSGKNDQGNNGGGFALLKAALLLCLLLLAPFAEAKEAAPVAENPEIERRMVALSEDLRCLVCQNET
IAASRADFANDLRREIREQMQANKSDKEIVDFLVARYGDFVLYRPPMKSTTLLLWFGPFIFLLTGAVFLVFYLKRRRKHI
EEPALSEQQLKQAEALLKEGKG

Sequences:

>Translated_182_residues
MRLKLLSRSSLAACGSGKNDQGNNGGGFALLKAALLLCLLLLAPFAEAKEAAPVAENPEIERRMVALSEDLRCLVCQNET
IAASRADFANDLRREIREQMQANKSDKEIVDFLVARYGDFVLYRPPMKSTTLLLWFGPFIFLLTGAVFLVFYLKRRRKHI
EEPALSEQQLKQAEALLKEGKG
>Mature_182_residues
MRLKLLSRSSLAACGSGKNDQGNNGGGFALLKAALLLCLLLLAPFAEAKEAAPVAENPEIERRMVALSEDLRCLVCQNET
IAASRADFANDLRREIREQMQANKSDKEIVDFLVARYGDFVLYRPPMKSTTLLLWFGPFIFLLTGAVFLVFYLKRRRKHI
EEPALSEQQLKQAEALLKEGKG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=114, Percent_Identity=42.1052631578947, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 20329; Mature: 20329

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKLLSRSSLAACGSGKNDQGNNGGGFALLKAALLLCLLLLAPFAEAKEAAPVAENPEI
CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHH
ERRMVALSEDLRCLVCQNETIAASRADFANDLRREIREQMQANKSDKEIVDFLVARYGDF
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCE
VLYRPPMKSTTLLLWFGPFIFLLTGAVFLVFYLKRRRKHIEEPALSEQQLKQAEALLKEG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
KG
CC
>Mature Secondary Structure
MRLKLLSRSSLAACGSGKNDQGNNGGGFALLKAALLLCLLLLAPFAEAKEAAPVAENPEI
CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHH
ERRMVALSEDLRCLVCQNETIAASRADFANDLRREIREQMQANKSDKEIVDFLVARYGDF
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCE
VLYRPPMKSTTLLLWFGPFIFLLTGAVFLVFYLKRRRKHIEEPALSEQQLKQAEALLKEG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]