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The map label for this gene is rnfH [H]

Identifier: 82702330

GI number: 82702330

Start: 1388585

End: 1388875

Strand: Reverse

Name: rnfH [H]

Synonym: Nmul_A1201

Alternate gene names: 82702330

Gene position: 1388875-1388585 (Counterclockwise)

Preceding gene: 82702331

Following gene: 82702329

Centisome position: 43.62

GC content: 52.92

Gene sequence:

>291_bases
ATGGAAGTTCCTGGTCGGAATATTGATATCGAAGTGGTGTATGCATTGCCGGAGAGACAGGTTGTACGGCAGATGAATTT
GCCGGAGGGCACTACCGTGGAACAAGCGGTAAAACTATCCGGCATCCTCCCCCGGTTTCCCGAGATCGACCTCCTGAAAA
ACAAGCTCGGTATATATGGCAAACTGGTCCCGCCAACCACGGTTCTGCGCGATCGCGACCGGATAGAAATTTACCGTACT
CTGAGGGTCGATCCCAAGGAAGCCCGCAGGAAGCGTGCAAAAAAACGGTGA

Upstream 100 bases:

>100_bases
CGTCTTCTTTGTCATTGCCAATAGCTTCGTGGAAGCATTCATCGAGCGCGCAGAAGAAGTTTATGGGAATTCCTGATCGG
GTATTGACGGCGGGAAGTCT

Downstream 100 bases:

>100_bases
TTGTGCATCACCCCGGAACGAAAATAAGAACCAAGCTTGTGAATGGAGGTGCGCCGTGAACAATTGCGACAAGTGGCCTA
CGGCATGAACAGATAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEVPGRNIDIEVVYALPERQVVRQMNLPEGTTVEQAVKLSGILPRFPEIDLLKNKLGIYGKLVPPTTVLRDRDRIEIYRT
LRVDPKEARRKRAKKR

Sequences:

>Translated_96_residues
MEVPGRNIDIEVVYALPERQVVRQMNLPEGTTVEQAVKLSGILPRFPEIDLLKNKLGIYGKLVPPTTVLRDRDRIEIYRT
LRVDPKEARRKRAKKR
>Mature_96_residues
MEVPGRNIDIEVVYALPERQVVRQMNLPEGTTVEQAVKLSGILPRFPEIDLLKNKLGIYGKLVPPTTVLRDRDRIEIYRT
LRVDPKEARRKRAKKR

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=93, Percent_Identity=50.5376344086022, Blast_Score=92, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 11162; Mature: 11162

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVPGRNIDIEVVYALPERQVVRQMNLPEGTTVEQAVKLSGILPRFPEIDLLKNKLGIYG
CCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEE
KLVPPTTVLRDRDRIEIYRTLRVDPKEARRKRAKKR
CCCCCCHHHCCCCCEEEHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEVPGRNIDIEVVYALPERQVVRQMNLPEGTTVEQAVKLSGILPRFPEIDLLKNKLGIYG
CCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEE
KLVPPTTVLRDRDRIEIYRTLRVDPKEARRKRAKKR
CCCCCCHHHCCCCCEEEHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA