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The map label for this gene is 82702305

Identifier: 82702305

GI number: 82702305

Start: 1354265

End: 1355227

Strand: Direct

Name: 82702305

Synonym: Nmul_A1176

Alternate gene names: NA

Gene position: 1354265-1355227 (Clockwise)

Preceding gene: 82702302

Following gene: 82702306

Centisome position: 42.53

GC content: 51.4

Gene sequence:

>963_bases
TTGTATTTCGATATTTGGCCCTGGAAAGGGGCTCATTTCCGATCAATCATGGTTGCATCTGCCTCCACCCGGGCTTTATG
GAAGGGCGCCATCAGTTTTGGACTGGTGCATATCCCCGTGGCCCTTCATACCGCAACGACAGAGCAGGGTTTGAATTTCG
ACTGGCTGGACAAGCGCAGTATGGATCCTGTCGGGTATAAACGCATCAACAAGAGGACCGGGAAGGAGATCGATAAGGAA
GATATCGTCAAGGGAATCGAGTACGAGGATGATCATTACGTGATTTTGAGCCAAGAGGAGATTGCTGCCGCTTATCCCAA
GACCACGCAGACGATCGCGATCGAAATGTTCGTGCCGGCAACTGATATACCCTTCATCTATCTGGAGCGTCCCTACTATG
TCACACCCGCCAATAAAGGCGAAAAAGTTTATGCGCTTTTGCGCGAGACCCTGTCCAGGACAGGGCGGGTCGGCATTGCC
CGAGTGATTATTCAGACAAAGCAGCATCTTGCCGCTCTTATTCCGTTCGGTCGCGCATTGGTTCTTAATCTATTGCGCTG
GGGAGATGAAATCCGCAGCTCGGAAAATATGAGTTTTCCGGCCGAAGGCGCCAAGGAAACCGGCATTACCGATAAAGAAT
TGAAAATGGCTGAGCAGTTGGTAATGGACATGAGTGGCAAATGGAACCCGGAAGAATTTCATGATTCGTTTAAGGACGAA
ATCATGAAACTTGTGAACGAGAAAGTTGAAACGGGTGATATACAAACCGTAGCAGAGCCGGAAGAAGTCGAGTTACAGCG
TGGCGGTGCGCAAATACTCGATCTCACTGAATTGCTCCAGCGCAGCCTGAAGAAACACACAGACAACGAAGACCGTGACC
GGCGACCTGTCAGAAAGCCCGCCAAATCGACGACTGCCTCATCTGCGCCTGCCCGCAGCGCACACAAGCGCCGGGCGGTA
TAG

Upstream 100 bases:

>100_bases
TTCCGTTCGAAAGAACACAAATCAGAGTGGCGGAGTGGAAAAGGCTTGTATCTCCAGGGTGCGCAATCGCACATACAAGC
GGAGGGGGGAGGAGCATGAT

Downstream 100 bases:

>100_bases
GGCGAATTCGATAGAATGACAAATGATGACTCGCTTAAAACTTACCGGGCCAAACGTGATTTCTCGGTAACACCTGAGCC
AAGCGGCGTTGCCAGTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MYFDIWPWKGAHFRSIMVASASTRALWKGAISFGLVHIPVALHTATTEQGLNFDWLDKRSMDPVGYKRINKRTGKEIDKE
DIVKGIEYEDDHYVILSQEEIAAAYPKTTQTIAIEMFVPATDIPFIYLERPYYVTPANKGEKVYALLRETLSRTGRVGIA
RVIIQTKQHLAALIPFGRALVLNLLRWGDEIRSSENMSFPAEGAKETGITDKELKMAEQLVMDMSGKWNPEEFHDSFKDE
IMKLVNEKVETGDIQTVAEPEEVELQRGGAQILDLTELLQRSLKKHTDNEDRDRRPVRKPAKSTTASSAPARSAHKRRAV

Sequences:

>Translated_320_residues
MYFDIWPWKGAHFRSIMVASASTRALWKGAISFGLVHIPVALHTATTEQGLNFDWLDKRSMDPVGYKRINKRTGKEIDKE
DIVKGIEYEDDHYVILSQEEIAAAYPKTTQTIAIEMFVPATDIPFIYLERPYYVTPANKGEKVYALLRETLSRTGRVGIA
RVIIQTKQHLAALIPFGRALVLNLLRWGDEIRSSENMSFPAEGAKETGITDKELKMAEQLVMDMSGKWNPEEFHDSFKDE
IMKLVNEKVETGDIQTVAEPEEVELQRGGAQILDLTELLQRSLKKHTDNEDRDRRPVRKPAKSTTASSAPARSAHKRRAV
>Mature_320_residues
MYFDIWPWKGAHFRSIMVASASTRALWKGAISFGLVHIPVALHTATTEQGLNFDWLDKRSMDPVGYKRINKRTGKEIDKE
DIVKGIEYEDDHYVILSQEEIAAAYPKTTQTIAIEMFVPATDIPFIYLERPYYVTPANKGEKVYALLRETLSRTGRVGIA
RVIIQTKQHLAALIPFGRALVLNLLRWGDEIRSSENMSFPAEGAKETGITDKELKMAEQLVMDMSGKWNPEEFHDSFKDE
IMKLVNEKVETGDIQTVAEPEEVELQRGGAQILDLTELLQRSLKKHTDNEDRDRRPVRKPAKSTTASSAPARSAHKRRAV

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 36326; Mature: 36326

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFDIWPWKGAHFRSIMVASASTRALWKGAISFGLVHIPVALHTATTEQGLNFDWLDKRS
CCEECCCCCCCCHHEEEEECCHHHHHHHHHHHHHHEEEEHEEEECCCCCCCCCCCCCCCC
MDPVGYKRINKRTGKEIDKEDIVKGIEYEDDHYVILSQEEIAAAYPKTTQTIAIEMFVPA
CCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECHHHHHHCCCCCEEEEEEEEECC
TDIPFIYLERPYYVTPANKGEKVYALLRETLSRTGRVGIARVIIQTKQHLAALIPFGRAL
CCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH
VLNLLRWGDEIRSSENMSFPAEGAKETGITDKELKMAEQLVMDMSGKWNPEEFHDSFKDE
HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IMKLVNEKVETGDIQTVAEPEEVELQRGGAQILDLTELLQRSLKKHTDNEDRDRRPVRKP
HHHHHHHHCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCC
AKSTTASSAPARSAHKRRAV
CHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MYFDIWPWKGAHFRSIMVASASTRALWKGAISFGLVHIPVALHTATTEQGLNFDWLDKRS
CCEECCCCCCCCHHEEEEECCHHHHHHHHHHHHHHEEEEHEEEECCCCCCCCCCCCCCCC
MDPVGYKRINKRTGKEIDKEDIVKGIEYEDDHYVILSQEEIAAAYPKTTQTIAIEMFVPA
CCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEECHHHHHHCCCCCEEEEEEEEECC
TDIPFIYLERPYYVTPANKGEKVYALLRETLSRTGRVGIARVIIQTKQHLAALIPFGRAL
CCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHH
VLNLLRWGDEIRSSENMSFPAEGAKETGITDKELKMAEQLVMDMSGKWNPEEFHDSFKDE
HHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IMKLVNEKVETGDIQTVAEPEEVELQRGGAQILDLTELLQRSLKKHTDNEDRDRRPVRKP
HHHHHHHHCCCCCCEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCC
AKSTTASSAPARSAHKRRAV
CHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]