| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is sir1 [H]
Identifier: 82702275
GI number: 82702275
Start: 1318485
End: 1320578
Strand: Direct
Name: sir1 [H]
Synonym: Nmul_A1146
Alternate gene names: 82702275
Gene position: 1318485-1320578 (Clockwise)
Preceding gene: 82702270
Following gene: 82702276
Centisome position: 41.41
GC content: 57.5
Gene sequence:
>2094_bases ATGGGTTATCTGGATAACCTCGCAAATGACGGGGAAATAGCTTTGTACGATCAGTCGGTACAGGAGTACCGCGATCTGAA AATGGATGTTACGCGCTTTACTGCCGGCCGCCTTCAAATGGGGATTTATGGCCAGCGGCAGGAAGGGGTCAACATGGTGC GTATCAAGCTGCCCGGCGGACGGGTATCCGCTCCGAAACTGAGAACGATCGCCTCCGCCTTGGAGAAATTTTCCCGGCAC GATGTGGTCCATATCACCACGCGCCAGGATATCCAGATGCATTACGTGCCCCTGGAGCAAACACCGGCCACCCTGCGCCA CTTGGCGGAAGGGGGGTTGACCACCCGCGAGGCCTGCGGCAATACGATACGGAATATAACGACTTGCCCGCTTTCCGGGG TGTGTCCTCGCCAGCATACCGACGTCACCCATCACCTGGAGGGAACGGTGCGGCATATGCTGCGCAATCCCTTGACGCAG CAGATGCCGCGCAAGTTCAAGATCAGCCTGTCAGCGTGCGAGGCTGATTGTGCGCAGGGGATGATGCATGATCTCGGGGC CATCGCGGTACGCAATGGGGAGCACTTCGGCTTCAAGGTTGTTGCGGGCGGTGGTCTCGGACACAAGCCGCATGAAGCTA TCGTTGTAGAAGAATTCATCGAGGAGAAGGATCTGCTGGCGGTGATGGAAGCAGTGATTCAACTGCACAACCGCTATTCG GATCGTACCAAACGCGCGAAATCGCGAATCAAGTTTCTGGTGGACAAATTCGGTCCTGAAGGGTTTGTCGAAAAATATCG CGAAGAGTTGGTGCGTACCAAATCGGCACTGGCAAACATTGATTACCCGAAAGGCGAATGGAGTCCCGGCAAGGAGGGGG AAGCGCCAGGCATTGGCGCCCCGCGCCGTATTTTCCCGCAGAAACAGGCAGGCTACTATGTATTCCCCATCAGCGTGCCG ATGGGCAACCTGAACGCAAGCCAATTGCGCGCCCTCGCCGATATCTGTGACACCTTCGAGTTGCCCGATATCCGCACAAG CCAGGATCAGAACATGTTCCTGTCAGACGTGCCCGAAGCCAAAATCGAGCCCCTGCGCGCTGCCCTTGCTGCGTTGGGAT TGGGAGTGCCGAAGGCGGGCGATGATGTGGTGGCCTGTCCGGGAACATCGACGTGCCGTTTGGGGATTACTTCCAGCACG ATCGTGGGACCCAAACTGAGCGGGGGCGAGCATGACCTGAAGATACGGGTATCAGGATGTCATAATGGCTGCGCACAGCC GGAAGCGGGAGATATCGGCATCTACGGTGAAGGCAAGCGCATGCACGGCAAACTCGTGCCGCATTACCAGATGCACTTCG GGGGTAATGGGATGGCGCGCGGCGCGCTGGCGTTCAAAGGCCCATCGATACCGACAGCGCGTATCGAGGAGGCGGTGAAA CGGGTGCAATCGGCTTTTTCAGCTACACGTGAAGCGGATGAGCCATTCTTTTCCTGGGCGCATCGGAAGGATAAAGCCTA TTTCAATGATCTGCTGGCGGATCTGGTGGAGGTCAAGCCCGAACAAGTGGAATCTGTTCTACGCGATCATGGCCAGAAGG CTGATTTCAAGGTGTTGCAATTGGGCGGGGGTGAGTGTGCGGGCATAGTACAGACAAGGACGGGCACGAGCTTTTTCGAA GCGGCACATGAGCGCAATTATCGGGATGCGCTCAAGTTTCAACTGAAATTTGCCGATTCTGTTGGGTGCGCCGAAGAAAT TGCGCGCCTGCTCGCACAAGGTACGCTGGAACTGATTGGCGGCCAGAAGCGCGACGACTTGTCGGATTTGGCGGAGGAAT TCCGACGTTTGCTGCCCACCAAGCCGCGGCTGTCCCGGCAGTTGGCCAAATTTGCGGAAGATTTCGCGAGCCCTGCGGAA GAGTTGAATGACGCTCGCCTGACCGAGTGGTTTGCCGAATTGGATACGTGGACGATGGAGGTCGCGCAGTTCTGCCTGGA TTTCGACCGTGGGCTCGATCTGGAGGGTGCGCTGCCGAGGCCGCTTCCCGCGAAGTCAGCGTTGGGACGGGTACCTTCAT CGGCAACTGTCTGA
Upstream 100 bases:
>100_bases TTCGATGCATCATGCGCGGTTTCCTGCTCCTCGCATGTGTGGGCGAAGCGGGGAGAGGTGATGGGATATGGCAGACACAG TGGAATAGTGGAGGACGTAA
Downstream 100 bases:
>100_bases TTAACTCGATGAATGATTGGCCGGGAATGATTGGTTGAGGACATGAGCCTGGATCAAAAAATTGCAGAGGTGCGAACCCT GCTCGAGAGGGTGCAGAAAG
Product: nitrite and sulfite reductase 4Fe-4S region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MGYLDNLANDGEIALYDQSVQEYRDLKMDVTRFTAGRLQMGIYGQRQEGVNMVRIKLPGGRVSAPKLRTIASALEKFSRH DVVHITTRQDIQMHYVPLEQTPATLRHLAEGGLTTREACGNTIRNITTCPLSGVCPRQHTDVTHHLEGTVRHMLRNPLTQ QMPRKFKISLSACEADCAQGMMHDLGAIAVRNGEHFGFKVVAGGGLGHKPHEAIVVEEFIEEKDLLAVMEAVIQLHNRYS DRTKRAKSRIKFLVDKFGPEGFVEKYREELVRTKSALANIDYPKGEWSPGKEGEAPGIGAPRRIFPQKQAGYYVFPISVP MGNLNASQLRALADICDTFELPDIRTSQDQNMFLSDVPEAKIEPLRAALAALGLGVPKAGDDVVACPGTSTCRLGITSST IVGPKLSGGEHDLKIRVSGCHNGCAQPEAGDIGIYGEGKRMHGKLVPHYQMHFGGNGMARGALAFKGPSIPTARIEEAVK RVQSAFSATREADEPFFSWAHRKDKAYFNDLLADLVEVKPEQVESVLRDHGQKADFKVLQLGGGECAGIVQTRTGTSFFE AAHERNYRDALKFQLKFADSVGCAEEIARLLAQGTLELIGGQKRDDLSDLAEEFRRLLPTKPRLSRQLAKFAEDFASPAE ELNDARLTEWFAELDTWTMEVAQFCLDFDRGLDLEGALPRPLPAKSALGRVPSSATV
Sequences:
>Translated_697_residues MGYLDNLANDGEIALYDQSVQEYRDLKMDVTRFTAGRLQMGIYGQRQEGVNMVRIKLPGGRVSAPKLRTIASALEKFSRH DVVHITTRQDIQMHYVPLEQTPATLRHLAEGGLTTREACGNTIRNITTCPLSGVCPRQHTDVTHHLEGTVRHMLRNPLTQ QMPRKFKISLSACEADCAQGMMHDLGAIAVRNGEHFGFKVVAGGGLGHKPHEAIVVEEFIEEKDLLAVMEAVIQLHNRYS DRTKRAKSRIKFLVDKFGPEGFVEKYREELVRTKSALANIDYPKGEWSPGKEGEAPGIGAPRRIFPQKQAGYYVFPISVP MGNLNASQLRALADICDTFELPDIRTSQDQNMFLSDVPEAKIEPLRAALAALGLGVPKAGDDVVACPGTSTCRLGITSST IVGPKLSGGEHDLKIRVSGCHNGCAQPEAGDIGIYGEGKRMHGKLVPHYQMHFGGNGMARGALAFKGPSIPTARIEEAVK RVQSAFSATREADEPFFSWAHRKDKAYFNDLLADLVEVKPEQVESVLRDHGQKADFKVLQLGGGECAGIVQTRTGTSFFE AAHERNYRDALKFQLKFADSVGCAEEIARLLAQGTLELIGGQKRDDLSDLAEEFRRLLPTKPRLSRQLAKFAEDFASPAE ELNDARLTEWFAELDTWTMEVAQFCLDFDRGLDLEGALPRPLPAKSALGRVPSSATV >Mature_696_residues GYLDNLANDGEIALYDQSVQEYRDLKMDVTRFTAGRLQMGIYGQRQEGVNMVRIKLPGGRVSAPKLRTIASALEKFSRHD VVHITTRQDIQMHYVPLEQTPATLRHLAEGGLTTREACGNTIRNITTCPLSGVCPRQHTDVTHHLEGTVRHMLRNPLTQQ MPRKFKISLSACEADCAQGMMHDLGAIAVRNGEHFGFKVVAGGGLGHKPHEAIVVEEFIEEKDLLAVMEAVIQLHNRYSD RTKRAKSRIKFLVDKFGPEGFVEKYREELVRTKSALANIDYPKGEWSPGKEGEAPGIGAPRRIFPQKQAGYYVFPISVPM GNLNASQLRALADICDTFELPDIRTSQDQNMFLSDVPEAKIEPLRAALAALGLGVPKAGDDVVACPGTSTCRLGITSSTI VGPKLSGGEHDLKIRVSGCHNGCAQPEAGDIGIYGEGKRMHGKLVPHYQMHFGGNGMARGALAFKGPSIPTARIEEAVKR VQSAFSATREADEPFFSWAHRKDKAYFNDLLADLVEVKPEQVESVLRDHGQKADFKVLQLGGGECAGIVQTRTGTSFFEA AHERNYRDALKFQLKFADSVGCAEEIARLLAQGTLELIGGQKRDDLSDLAEEFRRLLPTKPRLSRQLAKFAEDFASPAEE LNDARLTEWFAELDTWTMEVAQFCLDFDRGLDLEGALPRPLPAKSALGRVPSSATV
Specific function: This Enzyme Catalyzes The 6-Electron Reduction Of Sulfite To Sulfide. This Is One Of Several Activities Required For The Biosynthesis Of L-Cysteine From Sulfate. [C]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.7.1 [H]
Molecular weight: Translated: 76783; Mature: 76652
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYLDNLANDGEIALYDQSVQEYRDLKMDVTRFTAGRLQMGIYGQRQEGVNMVRIKLPGG CCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCC RVSAPKLRTIASALEKFSRHDVVHITTRQDIQMHYVPLEQTPATLRHLAEGGLTTREACG CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHH NTIRNITTCPLSGVCPRQHTDVTHHLEGTVRHMLRNPLTQQMPRKFKISLSACEADCAQG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHHHHHHHH MMHDLGAIAVRNGEHFGFKVVAGGGLGHKPHEAIVVEEFIEEKDLLAVMEAVIQLHNRYS HHHHHCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DRTKRAKSRIKFLVDKFGPEGFVEKYREELVRTKSALANIDYPKGEWSPGKEGEAPGIGA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PRRIFPQKQAGYYVFPISVPMGNLNASQLRALADICDTFELPDIRTSQDQNMFLSDVPEA CHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHH KIEPLRAALAALGLGVPKAGDDVVACPGTSTCRLGITSSTIVGPKLSGGEHDLKIRVSGC HHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCEEEEEEECC HNGCAQPEAGDIGIYGEGKRMHGKLVPHYQMHFGGNGMARGALAFKGPSIPTARIEEAVK CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH RVQSAFSATREADEPFFSWAHRKDKAYFNDLLADLVEVKPEQVESVLRDHGQKADFKVLQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE LGGGECAGIVQTRTGTSFFEAAHERNYRDALKFQLKFADSVGCAEEIARLLAQGTLELIG ECCCCEEEEEEECCCCHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHCHHHHHC GQKRDDLSDLAEEFRRLLPTKPRLSRQLAKFAEDFASPAEELNDARLTEWFAELDTWTME CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHH VAQFCLDFDRGLDLEGALPRPLPAKSALGRVPSSATV HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure GYLDNLANDGEIALYDQSVQEYRDLKMDVTRFTAGRLQMGIYGQRQEGVNMVRIKLPGG CCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEECCCC RVSAPKLRTIASALEKFSRHDVVHITTRQDIQMHYVPLEQTPATLRHLAEGGLTTREACG CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHH NTIRNITTCPLSGVCPRQHTDVTHHLEGTVRHMLRNPLTQQMPRKFKISLSACEADCAQG HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEEEHHHHHHHHHHH MMHDLGAIAVRNGEHFGFKVVAGGGLGHKPHEAIVVEEFIEEKDLLAVMEAVIQLHNRYS HHHHHCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH DRTKRAKSRIKFLVDKFGPEGFVEKYREELVRTKSALANIDYPKGEWSPGKEGEAPGIGA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PRRIFPQKQAGYYVFPISVPMGNLNASQLRALADICDTFELPDIRTSQDQNMFLSDVPEA CHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHH KIEPLRAALAALGLGVPKAGDDVVACPGTSTCRLGITSSTIVGPKLSGGEHDLKIRVSGC HHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCEEEEEEECC HNGCAQPEAGDIGIYGEGKRMHGKLVPHYQMHFGGNGMARGALAFKGPSIPTARIEEAVK CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHH RVQSAFSATREADEPFFSWAHRKDKAYFNDLLADLVEVKPEQVESVLRDHGQKADFKVLQ HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEE LGGGECAGIVQTRTGTSFFEAAHERNYRDALKFQLKFADSVGCAEEIARLLAQGTLELIG ECCCCEEEEEEECCCCHHHHHHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHCHHHHHC GQKRDDLSDLAEEFRRLLPTKPRLSRQLAKFAEDFASPAEELNDARLTEWFAELDTWTME CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHH VAQFCLDFDRGLDLEGALPRPLPAKSALGRVPSSATV HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA