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The map label for this gene is comF [H]

Identifier: 82702257

GI number: 82702257

Start: 1297466

End: 1298185

Strand: Reverse

Name: comF [H]

Synonym: Nmul_A1128

Alternate gene names: 82702257

Gene position: 1298185-1297466 (Counterclockwise)

Preceding gene: 82702263

Following gene: 82702256

Centisome position: 40.77

GC content: 53.33

Gene sequence:

>720_bases
TTGTTGTCAATTTTTTGCTCGATTTTTTTGAACTATCGCTTAAAAATAGTGCAGTTGTTATTCGGGAGAAATTGCTTCCT
CTGTGGAAGCGCCGCTACTGAAGACCTTTGCACGCCTTGCCGGGACAGCCTGCCTCATATTTCAGGCCCTCACTGCCCGG
TTTGCGCGTTACCCATGGAGGAAGCCCGTGTCTGCGGTGCCTGCCTTGCTCATCCCCCGGCCTTTGATCTTACGCTCGCC
GCTGTAAATTATGCCTTTCCGATCGATGCGCTTCTCCACTCACTCAAATACCGGACTAATCTTGCCTTGGCACCGGTCCT
GGCAGATTTGCTGCTGGCGCAGATCGACAAGGCTGTATTACCGGATTTCATCGTCCCGATGCCATTACACGCGGTAAGAT
TGCGGGAACGGGGTTTCAACCAGGCGATGGAGATAGGCCGGCAGATATCGAAAAAACTGGATGTTCCCCTGCTGCCCGCG
CTATGTCGTCGCGTCAGGGATACGGCTTCCCAGACCCGGCTTCCGTGGAAGGAGCGAGAAAAAAATATTCGAAATGCGTT
TGACTGCGAGGAGAACTTAGACGGAAAGCATATTGCAATCGTCGATGATGTAATGACCACGGGCGCAACGTTGAACGAGT
TGGCCAGAGTACTGCGTAAATGCGGCGCCGTTCATATCAGCGCGTGGGTAGTCGCACGCACGCTTCCCGGCACTCCATAA

Upstream 100 bases:

>100_bases
TTGTCTGAACCCTGTTCACGATAAACGAAATGAAAGCCAAATGGCTCTCATTTTCCCGCCTCGTCTTTAGTAGCGAATGG
CATAATCACAAATTGCGCCG

Downstream 100 bases:

>100_bases
AAACATTCCATAAAAACAACATGTAAGACAGAATCAATATGTTCGACGTAATTCTGTATCAACCCGAGATTCCACCCAAT
ACCGGCAATATCATTCGCCT

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLSIFCSIFLNYRLKIVQLLFGRNCFLCGSAATEDLCTPCRDSLPHISGPHCPVCALPMEEARVCGACLAHPPAFDLTLA
AVNYAFPIDALLHSLKYRTNLALAPVLADLLLAQIDKAVLPDFIVPMPLHAVRLRERGFNQAMEIGRQISKKLDVPLLPA
LCRRVRDTASQTRLPWKEREKNIRNAFDCEENLDGKHIAIVDDVMTTGATLNELARVLRKCGAVHISAWVVARTLPGTP

Sequences:

>Translated_239_residues
MLSIFCSIFLNYRLKIVQLLFGRNCFLCGSAATEDLCTPCRDSLPHISGPHCPVCALPMEEARVCGACLAHPPAFDLTLA
AVNYAFPIDALLHSLKYRTNLALAPVLADLLLAQIDKAVLPDFIVPMPLHAVRLRERGFNQAMEIGRQISKKLDVPLLPA
LCRRVRDTASQTRLPWKEREKNIRNAFDCEENLDGKHIAIVDDVMTTGATLNELARVLRKCGAVHISAWVVARTLPGTP
>Mature_239_residues
MLSIFCSIFLNYRLKIVQLLFGRNCFLCGSAATEDLCTPCRDSLPHISGPHCPVCALPMEEARVCGACLAHPPAFDLTLA
AVNYAFPIDALLHSLKYRTNLALAPVLADLLLAQIDKAVLPDFIVPMPLHAVRLRERGFNQAMEIGRQISKKLDVPLLPA
LCRRVRDTASQTRLPWKEREKNIRNAFDCEENLDGKHIAIVDDVMTTGATLNELARVLRKCGAVHISAWVVARTLPGTP

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=191, Percent_Identity=37.17277486911, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 26419; Mature: 26419

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIFCSIFLNYRLKIVQLLFGRNCFLCGSAATEDLCTPCRDSLPHISGPHCPVCALPME
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCHH
EARVCGACLAHPPAFDLTLAAVNYAFPIDALLHSLKYRTNLALAPVLADLLLAQIDKAVL
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
PDFIVPMPLHAVRLRERGFNQAMEIGRQISKKLDVPLLPALCRRVRDTASQTRLPWKERE
CHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
KNIRNAFDCEENLDGKHIAIVDDVMTTGATLNELARVLRKCGAVHISAWVVARTLPGTP
HHHHHHHCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSIFCSIFLNYRLKIVQLLFGRNCFLCGSAATEDLCTPCRDSLPHISGPHCPVCALPME
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCHH
EARVCGACLAHPPAFDLTLAAVNYAFPIDALLHSLKYRTNLALAPVLADLLLAQIDKAVL
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
PDFIVPMPLHAVRLRERGFNQAMEIGRQISKKLDVPLLPALCRRVRDTASQTRLPWKERE
CHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH
KNIRNAFDCEENLDGKHIAIVDDVMTTGATLNELARVLRKCGAVHISAWVVARTLPGTP
HHHHHHHCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]