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The map label for this gene is yedU [C]

Identifier: 82702263

GI number: 82702263

Start: 1303809

End: 1304561

Strand: Reverse

Name: yedU [C]

Synonym: Nmul_A1134

Alternate gene names: 82702263

Gene position: 1304561-1303809 (Counterclockwise)

Preceding gene: 82702264

Following gene: 82702257

Centisome position: 40.97

GC content: 51.13

Gene sequence:

>753_bases
ATGATTGTGACCAGCAAGATTCTTATCATCGTTACCAACTCTGACCTGTTTGAAAAGGTGGGATACAGAACGGGACTGTG
GCTTAGCGAACTCGTCGAATTTTGGGATATTGCTGAAGAAGCAGGCTATAAGATGGATATTGCCAGTCCGTCGGGTGGCA
AAACTCCCCTTGATCCCGAAAGCCTGCTCATCACGGAAATGGGTGACGCCATCGGCCTCAGGGGGAGTCTTTCCAGGCGC
TACGAAGATAAGGGCTTCATGAGTCGGCTGGACAACACGTTGAAAGTATCCGACGCGGATCCGGCCGGGTACGATGCCAT
CTATATGACGGGGGGGCACGGGGTCATGTTCGACTTTCCAAAAAGCGCATCATTGGCGGAATTGACCGCCGGATTCTATG
AAGCCGGCAAGATTGTTTCGGCCGCGTGCCATGGACCTTGCGGGCTGCTGGAAGTGAAACTGAGCGACGGGACATATCTT
ATTAATGGTAAGCAGATAACGGGTTTTTCGTGGAAGGAAGAGAAATTGGCAAACCGCGATGAGGCGGTTCCGTTCAACCT
GGAGGAAGAACTACAAAAGCGAGGGGGGCGATACAGCAAGGCAATGATGCCGTTTGGCTCCCATGTGGTGGAGGATGGCC
TCCTGATTACGGCCCAGAATCCAAAAAGTACCAAAAATCTGGGCCAGGCCGTGATCAAGAAGCTCAAGGAACTCAAAGAA
ATAGATTCCTTGCCAAAGGAAATGTTTTTATGA

Upstream 100 bases:

>100_bases
GATAACCGAGCAGATCAGCCTGAAAGACGCGTGGTATTAAATAGACTTGGCTATCGCAACCAGCCAATTAATGGGTGGCC
ATTACACATAGGAGCAAAAA

Downstream 100 bases:

>100_bases
ACGATGATACATCGTCTACAGAAGTTGCCGATCTGGATGAAAAATGCAACAACGGCAAGCGCCGTAGGGTGCAGTGCCGC
TAGATTACAGAGTAGCGAGC

Product: ThiJ/PfpI

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Intracellular Protease/Amidase-Like; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIVTSKILIIVTNSDLFEKVGYRTGLWLSELVEFWDIAEEAGYKMDIASPSGGKTPLDPESLLITEMGDAIGLRGSLSRR
YEDKGFMSRLDNTLKVSDADPAGYDAIYMTGGHGVMFDFPKSASLAELTAGFYEAGKIVSAACHGPCGLLEVKLSDGTYL
INGKQITGFSWKEEKLANRDEAVPFNLEEELQKRGGRYSKAMMPFGSHVVEDGLLITAQNPKSTKNLGQAVIKKLKELKE
IDSLPKEMFL

Sequences:

>Translated_250_residues
MIVTSKILIIVTNSDLFEKVGYRTGLWLSELVEFWDIAEEAGYKMDIASPSGGKTPLDPESLLITEMGDAIGLRGSLSRR
YEDKGFMSRLDNTLKVSDADPAGYDAIYMTGGHGVMFDFPKSASLAELTAGFYEAGKIVSAACHGPCGLLEVKLSDGTYL
INGKQITGFSWKEEKLANRDEAVPFNLEEELQKRGGRYSKAMMPFGSHVVEDGLLITAQNPKSTKNLGQAVIKKLKELKE
IDSLPKEMFL
>Mature_250_residues
MIVTSKILIIVTNSDLFEKVGYRTGLWLSELVEFWDIAEEAGYKMDIASPSGGKTPLDPESLLITEMGDAIGLRGSLSRR
YEDKGFMSRLDNTLKVSDADPAGYDAIYMTGGHGVMFDFPKSASLAELTAGFYEAGKIVSAACHGPCGLLEVKLSDGTYL
INGKQITGFSWKEEKLANRDEAVPFNLEEELQKRGGRYSKAMMPFGSHVVEDGLLITAQNPKSTKNLGQAVIKKLKELKE
IDSLPKEMFL

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=240, Percent_Identity=27.9166666666667, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6324967, Length=218, Percent_Identity=27.0642201834862, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324975, Length=218, Percent_Identity=27.0642201834862, Blast_Score=92, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6323984, Length=218, Percent_Identity=26.605504587156, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27443; Mature: 27443

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTSKILIIVTNSDLFEKVGYRTGLWLSELVEFWDIAEEAGYKMDIASPSGGKTPLDPE
CEEECEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH
SLLITEMGDAIGLRGSLSRRYEDKGFMSRLDNTLKVSDADPAGYDAIYMTGGHGVMFDFP
HEEEECCCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCEEEEECC
KSASLAELTAGFYEAGKIVSAACHGPCGLLEVKLSDGTYLINGKQITGFSWKEEKLANRD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCEEECCCCHHHHHCCCC
EAVPFNLEEELQKRGGRYSKAMMPFGSHVVEDGLLITAQNPKSTKNLGQAVIKKLKELKE
CCCCCCHHHHHHHCCCCCHHHHCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHH
IDSLPKEMFL
HHCCHHHHCC
>Mature Secondary Structure
MIVTSKILIIVTNSDLFEKVGYRTGLWLSELVEFWDIAEEAGYKMDIASPSGGKTPLDPE
CEEECEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHH
SLLITEMGDAIGLRGSLSRRYEDKGFMSRLDNTLKVSDADPAGYDAIYMTGGHGVMFDFP
HEEEECCCCHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCEEEEECC
KSASLAELTAGFYEAGKIVSAACHGPCGLLEVKLSDGTYLINGKQITGFSWKEEKLANRD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCEEECCCCHHHHHCCCC
EAVPFNLEEELQKRGGRYSKAMMPFGSHVVEDGLLITAQNPKSTKNLGQAVIKKLKELKE
CCCCCCHHHHHHHCCCCCHHHHCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHH
IDSLPKEMFL
HHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA