| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is gpmA
Identifier: 82702250
GI number: 82702250
Start: 1293048
End: 1293803
Strand: Reverse
Name: gpmA
Synonym: Nmul_A1121
Alternate gene names: 82702250
Gene position: 1293803-1293048 (Counterclockwise)
Preceding gene: 82702256
Following gene: 82702249
Centisome position: 40.63
GC content: 53.44
Gene sequence:
>756_bases ATGAAAAAACTCGTTCTCCTGCGACATGGAGAAAGTACCTGGAACAAGGAGAATCGCTTTACGGGCTGGACAGACGTGGA CTTAACTCCAAAAGGAGCGGAGGAGGCCCACAATTCCGGACGCCTGCTGCGGGAAGCCGGATTCACCTTCGATATCGCCT ATACTTCGGTACTGAAGCGCGCCATTCGCACATTATGGATCGTGCTGGATGAAATGGATCAGATGTGGATTCCCGTCGAA TCATCGTGGCGGCTGAATGAGCGTCATTATGGGGCGCTGCAAGGCCTGAACAAACTTGAAACTGCAGTTGCATATGGTGA AGAGCAGGTATTGATCTGGCGGCGAAGTTACGATATTCGCCCCCCCGCCCTCACTCCCGATGATCCCCGGTACCCGGGAT GCGACCCTCGCTACCGGAACTTGCCAAAGCAGGATATTCCCCTTACCGAGTGCCTGCAGGATACCGTGTCACGGTTTCTG CCCTATTGGCGTGAAAGCATTGCTCCCCAGGTCAAAAGTGACAAAAGCGTGCTCATCACCGCGCATGGAAATTCGCTCCG GGCCCTCGTCATGTATCTTGACAACCTTTCCGAAGGGGAAATCATGGAGCTCAATATTCCGACCGGCATTCCGCTCGTAT ATGAGCTTGACGACGGCCTGAAACCAATCCGCAGCTATTATCTCGGAGACCAGGCAAAAATCGAGCAGGCCATGCAGGTC GTCGCGAATCAGGGAAAAATTCTGCCCAACCTTTAA
Upstream 100 bases:
>100_bases TCCTGTAGAGGTGACAGTTGGCCAGGCTGCTGCGGTAGTATCGAAAATACGGTAAAATTTAAAGTTTTCCCGTCGCGGAA AATCTTATCTACCCAAGAAC
Downstream 100 bases:
>100_bases CTTTTGGTTTAATCTCTGTTTTTCCTATTGCCGTACTTGCCGTGCCTGTTCTTTATACGCATACTCTCTGACTTCTGGTC CGGCTGCCTTTTCCTTCTCA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM 2; PGAM 2; Phosphoglyceromutase 2; dPGM 2
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKKLVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKRAIRTLWIVLDEMDQMWIPVE SSWRLNERHYGALQGLNKLETAVAYGEEQVLIWRRSYDIRPPALTPDDPRYPGCDPRYRNLPKQDIPLTECLQDTVSRFL PYWRESIAPQVKSDKSVLITAHGNSLRALVMYLDNLSEGEIMELNIPTGIPLVYELDDGLKPIRSYYLGDQAKIEQAMQV VANQGKILPNL
Sequences:
>Translated_251_residues MKKLVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKRAIRTLWIVLDEMDQMWIPVE SSWRLNERHYGALQGLNKLETAVAYGEEQVLIWRRSYDIRPPALTPDDPRYPGCDPRYRNLPKQDIPLTECLQDTVSRFL PYWRESIAPQVKSDKSVLITAHGNSLRALVMYLDNLSEGEIMELNIPTGIPLVYELDDGLKPIRSYYLGDQAKIEQAMQV VANQGKILPNL >Mature_251_residues MKKLVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKRAIRTLWIVLDEMDQMWIPVE SSWRLNERHYGALQGLNKLETAVAYGEEQVLIWRRSYDIRPPALTPDDPRYPGCDPRYRNLPKQDIPLTECLQDTVSRFL PYWRESIAPQVKSDKSVLITAHGNSLRALVMYLDNLSEGEIMELNIPTGIPLVYELDDGLKPIRSYYLGDQAKIEQAMQV VANQGKILPNL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI4505753, Length=247, Percent_Identity=60.7287449392713, Blast_Score=300, Evalue=1e-81, Organism=Homo sapiens, GI50593010, Length=247, Percent_Identity=56.2753036437247, Blast_Score=295, Evalue=2e-80, Organism=Homo sapiens, GI71274132, Length=247, Percent_Identity=58.2995951417004, Blast_Score=283, Evalue=7e-77, Organism=Homo sapiens, GI4502445, Length=250, Percent_Identity=49.2, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI40353764, Length=250, Percent_Identity=49.2, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=61.4906832298137, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=65.0406504065041, Blast_Score=341, Evalue=3e-95, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=50, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6320183, Length=299, Percent_Identity=33.4448160535117, Blast_Score=137, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324516, Length=286, Percent_Identity=31.8181818181818, Blast_Score=136, Evalue=4e-33, Organism=Drosophila melanogaster, GI24646216, Length=249, Percent_Identity=51.4056224899598, Blast_Score=260, Evalue=5e-70, Organism=Drosophila melanogaster, GI85725270, Length=248, Percent_Identity=53.2258064516129, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI85725272, Length=248, Percent_Identity=53.2258064516129, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI24650981, Length=248, Percent_Identity=53.2258064516129, Blast_Score=260, Evalue=7e-70, Organism=Drosophila melanogaster, GI28571815, Length=248, Percent_Identity=38.7096774193548, Blast_Score=168, Evalue=3e-42, Organism=Drosophila melanogaster, GI28571817, Length=248, Percent_Identity=38.7096774193548, Blast_Score=168, Evalue=3e-42, Organism=Drosophila melanogaster, GI24648979, Length=248, Percent_Identity=38.7096774193548, Blast_Score=167, Evalue=4e-42,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA2_NITMU (Q2Y9Z7)
Other databases:
- EMBL: CP000103 - RefSeq: YP_411816.1 - ProteinModelPortal: Q2Y9Z7 - SMR: Q2Y9Z7 - STRING: Q2Y9Z7 - GeneID: 3785701 - GenomeReviews: CP000103_GR - KEGG: nmu:Nmul_A1121 - eggNOG: COG0588 - HOGENOM: HBG658938 - OMA: TGWKDPD - PhylomeDB: Q2Y9Z7 - ProtClustDB: PRK14115 - BioCyc: NMUL323848:NMUL_A1121-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 28814; Mature: 28814
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKR CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEHHHHHHHHH AIRTLWIVLDEMDQMWIPVESSWRLNERHYGALQGLNKLETAVAYGEEQVLIWRRSYDIR HHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PPALTPDDPRYPGCDPRYRNLPKQDIPLTECLQDTVSRFLPYWRESIAPQVKSDKSVLIT CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVMYLDNLSEGEIMELNIPTGIPLVYELDDGLKPIRSYYLGDQAKIEQAMQV ECCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VANQGKILPNL HHHCCCCCCCC >Mature Secondary Structure MKKLVLLRHGESTWNKENRFTGWTDVDLTPKGAEEAHNSGRLLREAGFTFDIAYTSVLKR CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEHHHHHHHHH AIRTLWIVLDEMDQMWIPVESSWRLNERHYGALQGLNKLETAVAYGEEQVLIWRRSYDIR HHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PPALTPDDPRYPGCDPRYRNLPKQDIPLTECLQDTVSRFLPYWRESIAPQVKSDKSVLIT CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE AHGNSLRALVMYLDNLSEGEIMELNIPTGIPLVYELDDGLKPIRSYYLGDQAKIEQAMQV ECCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VANQGKILPNL HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA