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The map label for this gene is yibP [H]

Identifier: 82702249

GI number: 82702249

Start: 1291624

End: 1292820

Strand: Reverse

Name: yibP [H]

Synonym: Nmul_A1120

Alternate gene names: 82702249

Gene position: 1292820-1291624 (Counterclockwise)

Preceding gene: 82702250

Following gene: 82702248

Centisome position: 40.6

GC content: 53.88

Gene sequence:

>1197_bases
ATGTGGCAAGCACCTGTGACCGCAGAGCCATCCGATAGTGAAGAGTTGAAACAACTGAGAAACAAGATCGAGACGCTGGA
AAAGGAACTCACGGATACGGAGGGATACAGATCCGAAGCGGCGGGAGCGCTGCGCGAATCGGAAAAAGCGATCGATGTCG
CTAACCGGAGGCTTGCGGAACTCGCCAAGCAGCGGCGTGCCGCGAACAGCAAGCTTGGTCAACTGAAAGCGCAGTCGGCC
CAGATCAAGAAGGAAATAGCTGCGCAGCAACTGCAGTTGAGGAACCTGCTTTACGGGCTCTATATCGCCGGAGGCGGACG
AAAAGAGTACTTGAGTCTCTTGTTGAGCCAGCGGAATCCTAATGAAATAGCCCGCAATCTCCACTATTACGAATATTTCT
CACGCGCTCGCAAGGAAGGTATCGATGGCCTGCGTGCGAATCTTGAGAAGCTCAATACGCTCAGCCTCGCCAGCCGGGAA
AAAAGCGCGGAGATCTCGGGTGTGCATGCACGCCACGCTGAGCAGAAAATACAGCTCGAACAACAAAAAGACAGCCATGC
GAAGCTTCTGGCAGAAATATCACTGCAAGCCGAAGAGCAGCGGCGCGAAATCAACCGCCTCAGGCGTAATGAAGACCGCC
TCACCAGGCTGGTGGAAAAACTTACCAGGATGCTTGCGAAGAAAAAGAAATTCGAATCATCTGAAAAACCTTCCGAGCCA
GGCGCACCCCCTACTCCTGCCAGCAACAGCGGTTCCCCCGATTTATCTGAGAATGCGACGCCATTCACGAATGGAACGTC
CTTCTCCTCCCTTCGCGGCCACCTGAATTCACCGGTGCGCGGGGAACTTGCAAACCGCTTCGGCAGTCCACGTGCAGATG
GTGGCGTTACCTGGAAAGGGTTGTTCATCCGCGCCGCTGGCGGCGAGAGTGTGAAGGCGATTGCAAATGGACGCGTCGTA
TTCGCCGACTGGCTCAGAGGGTTCGGCAACCTGATGATTCTGGACCACGGCGACAACTATATGAGTCTTTATGGAAATAA
TGAAGCAGTCCATAAGCGGGTGGGAGACGTGATCAATGCCGGAGAGACGATAGCCACAGTAGGCAATAGCAGTGGAAATT
CCGATACCGGCCTATACTTCGAATTGCGCCATCAGGGCAAACCGTTTGACCCTTTGAACTGGGTCAGAATAAAATGA

Upstream 100 bases:

>100_bases
CTCACGCTCGATACGTTTGAAAATTTCAGCCTCAATCCGTATTCATCTCTGGCTCAAGGTCTGCCGTACGTTTATCCCTG
CGTGTGCGCTCTTACTCTTG

Downstream 100 bases:

>100_bases
TCTAAGCAACAATTTGACTTGTTTGGAGAATATTTAATGGGCGACAAAATGCGGCAGTTCGGCCTCGTCATTTTCGGTGC
AATCGCCGGCGTGATGCTGA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MWQAPVTAEPSDSEELKQLRNKIETLEKELTDTEGYRSEAAGALRESEKAIDVANRRLAELAKQRRAANSKLGQLKAQSA
QIKKEIAAQQLQLRNLLYGLYIAGGGRKEYLSLLLSQRNPNEIARNLHYYEYFSRARKEGIDGLRANLEKLNTLSLASRE
KSAEISGVHARHAEQKIQLEQQKDSHAKLLAEISLQAEEQRREINRLRRNEDRLTRLVEKLTRMLAKKKKFESSEKPSEP
GAPPTPASNSGSPDLSENATPFTNGTSFSSLRGHLNSPVRGELANRFGSPRADGGVTWKGLFIRAAGGESVKAIANGRVV
FADWLRGFGNLMILDHGDNYMSLYGNNEAVHKRVGDVINAGETIATVGNSSGNSDTGLYFELRHQGKPFDPLNWVRIK

Sequences:

>Translated_398_residues
MWQAPVTAEPSDSEELKQLRNKIETLEKELTDTEGYRSEAAGALRESEKAIDVANRRLAELAKQRRAANSKLGQLKAQSA
QIKKEIAAQQLQLRNLLYGLYIAGGGRKEYLSLLLSQRNPNEIARNLHYYEYFSRARKEGIDGLRANLEKLNTLSLASRE
KSAEISGVHARHAEQKIQLEQQKDSHAKLLAEISLQAEEQRREINRLRRNEDRLTRLVEKLTRMLAKKKKFESSEKPSEP
GAPPTPASNSGSPDLSENATPFTNGTSFSSLRGHLNSPVRGELANRFGSPRADGGVTWKGLFIRAAGGESVKAIANGRVV
FADWLRGFGNLMILDHGDNYMSLYGNNEAVHKRVGDVINAGETIATVGNSSGNSDTGLYFELRHQGKPFDPLNWVRIK
>Mature_398_residues
MWQAPVTAEPSDSEELKQLRNKIETLEKELTDTEGYRSEAAGALRESEKAIDVANRRLAELAKQRRAANSKLGQLKAQSA
QIKKEIAAQQLQLRNLLYGLYIAGGGRKEYLSLLLSQRNPNEIARNLHYYEYFSRARKEGIDGLRANLEKLNTLSLASRE
KSAEISGVHARHAEQKIQLEQQKDSHAKLLAEISLQAEEQRREINRLRRNEDRLTRLVEKLTRMLAKKKKFESSEKPSEP
GAPPTPASNSGSPDLSENATPFTNGTSFSSLRGHLNSPVRGELANRFGSPRADGGVTWKGLFIRAAGGESVKAIANGRVV
FADWLRGFGNLMILDHGDNYMSLYGNNEAVHKRVGDVINAGETIATVGNSSGNSDTGLYFELRHQGKPFDPLNWVRIK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=394, Percent_Identity=28.6802030456853, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=41.1764705882353, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=32.7731092436975, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44285; Mature: 44285

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQAPVTAEPSDSEELKQLRNKIETLEKELTDTEGYRSEAAGALRESEKAIDVANRRLAE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKQRRAANSKLGQLKAQSAQIKKEIAAQQLQLRNLLYGLYIAGGGRKEYLSLLLSQRNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCH
NEIARNLHYYEYFSRARKEGIDGLRANLEKLNTLSLASREKSAEISGVHARHAEQKIQLE
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH
QQKDSHAKLLAEISLQAEEQRREINRLRRNEDRLTRLVEKLTRMLAKKKKFESSEKPSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GAPPTPASNSGSPDLSENATPFTNGTSFSSLRGHLNSPVRGELANRFGSPRADGGVTWKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEE
LFIRAAGGESVKAIANGRVVFADWLRGFGNLMILDHGDNYMSLYGNNEAVHKRVGDVINA
EEEEECCCCCCHHHHCCCEEHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCC
GETIATVGNSSGNSDTGLYFELRHQGKPFDPLNWVRIK
CCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC
>Mature Secondary Structure
MWQAPVTAEPSDSEELKQLRNKIETLEKELTDTEGYRSEAAGALRESEKAIDVANRRLAE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKQRRAANSKLGQLKAQSAQIKKEIAAQQLQLRNLLYGLYIAGGGRKEYLSLLLSQRNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCH
NEIARNLHYYEYFSRARKEGIDGLRANLEKLNTLSLASREKSAEISGVHARHAEQKIQLE
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH
QQKDSHAKLLAEISLQAEEQRREINRLRRNEDRLTRLVEKLTRMLAKKKKFESSEKPSEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GAPPTPASNSGSPDLSENATPFTNGTSFSSLRGHLNSPVRGELANRFGSPRADGGVTWKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEE
LFIRAAGGESVKAIANGRVVFADWLRGFGNLMILDHGDNYMSLYGNNEAVHKRVGDVINA
EEEEECCCCCCHHHHCCCEEHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHCC
GETIATVGNSSGNSDTGLYFELRHQGKPFDPLNWVRIK
CCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]