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The map label for this gene is ctpA [H]

Identifier: 82702248

GI number: 82702248

Start: 1290142

End: 1291587

Strand: Reverse

Name: ctpA [H]

Synonym: Nmul_A1119

Alternate gene names: 82702248

Gene position: 1291587-1290142 (Counterclockwise)

Preceding gene: 82702249

Following gene: 82702247

Centisome position: 40.56

GC content: 54.43

Gene sequence:

>1446_bases
ATGGGCGACAAAATGCGGCAGTTCGGCCTCGTCATTTTCGGTGCAATCGCCGGCGTGATGCTGAGCCTCAATTTTTCTGC
TGTTGCCAATAAGGAACCGCAGGGGGTCCTGCATCCCCTTCCGGTGGAGGAGCTTCGGGCCTTCACAGAAGTGTTCGGCC
GGATAAAAAATGATTACGTCGAACCGGTAGAAGACAAAAAGCTCATCACTGAAGCCATCAATGGCATGCTGACAGGCCTC
GATCCCCATTCCGCCTATCTGGATGCAGATGCTTTCAAGGAGCTGCAGATTGGCACTCAGGGTGAGTTCGGGGGCCTGGG
CATCGAAGTGAGCATGGAAGACGGATTTGTCAAGGTCATTTCTCCTATCGAGGATACGCCCGCCTTCCGCGCCGGGATAA
AACCCGGAGATCTTATCATCAAGCTGGACGATACCGCGGTCAAGGGGCTCTCGCTTACGGAGGCCATCAAGCGCATGCGC
GGCAAGCCCGATACGCCTATTACCCTTACCGTCGTGCGCAAGGGCGAGGCCAAGCCGATTGTGTTCCCACTGGTTCGCGC
CGTCATCAGGATACAAAGCGTGAAGTCGAAAATGATCGAGCCTGGCTACGGATATATTCGTATCACCCAGTTTCAGGAAC
AGACGGGGGAAAACCTGGCGAAGGCGATAGATAAGCTTTTCAAGGAAAGCGGTGGCTCGATGAAGGGACTGGTGCTGGAC
TTGCGTAATGACCCGGGGGGCCTGTTGAATGGAGCAGTGGCAGTATCTGCGGCCTTTTTACCGGAGGATTCTCTGGTTGT
CTATACCGATGGCCGTAGCGAAGATGCGAAGATGAAACTCAAGGCCAGTCCCGAGTTCTATCTGCGCGATACGAAGAACG
ACTACGTCAAGCGGCTCCCAGCGGGTATCAAGACCGTACCGATGGTGACACTCGTAAATGGCGGCTCGGCTTCGGCTTCG
GAAATCGTTGCCGGCGCGCTGCAGGATCATAAACGGTCGATCGTGATGGGAACGCAAACCTTCGGTAAAGGTTCGGTGCA
AACCATTTTACCGCTGGGAAACAACACAGCTATCAAATTGACCACGGCACGGTACTATACGCCAAATGGACAATCCATCC
AGGCCAAGGGAATCACGCCTGATGTCATGGATGAATTGGCAAAGGATGAAGTCGAGCGCCTGCGTGAAGCTGATCTCGAT
CGTCATCTATCCAATGGCAAGGCTGAGGACCAGAAACGGGAGACGGAGGCGAAGGGAGTGCCGGAAACAAAGGTCGCGCC
AAAACCGGGAGTCAAGCCGGTCAAGTCCGAGAACGAGGAAGACAAGAACAAGAAGCGTGAGTCACCTGCTGAGTTCGGTT
CCAGCGATGACCTGCTGCTGGTTCAGGCTATCAGCTATATCAAGGAAAACGCCAGCAAGCGCGCAACTGCAAAAGTAGAA
AACTGA

Upstream 100 bases:

>100_bases
ATACTTCGAATTGCGCCATCAGGGCAAACCGTTTGACCCTTTGAACTGGGTCAGAATAAAATGATCTAAGCAACAATTTG
ACTTGTTTGGAGAATATTTA

Downstream 100 bases:

>100_bases
GGCAGCCCCGAACATCAGGCAGCGGAAGAATCGAGGCAAAATGCCATAATTCTTTCGCTGCCTGCATCCCTGCCAAATTC
ACAAATGTCGTGCATTAGTC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MGDKMRQFGLVIFGAIAGVMLSLNFSAVANKEPQGVLHPLPVEELRAFTEVFGRIKNDYVEPVEDKKLITEAINGMLTGL
DPHSAYLDADAFKELQIGTQGEFGGLGIEVSMEDGFVKVISPIEDTPAFRAGIKPGDLIIKLDDTAVKGLSLTEAIKRMR
GKPDTPITLTVVRKGEAKPIVFPLVRAVIRIQSVKSKMIEPGYGYIRITQFQEQTGENLAKAIDKLFKESGGSMKGLVLD
LRNDPGGLLNGAVAVSAAFLPEDSLVVYTDGRSEDAKMKLKASPEFYLRDTKNDYVKRLPAGIKTVPMVTLVNGGSASAS
EIVAGALQDHKRSIVMGTQTFGKGSVQTILPLGNNTAIKLTTARYYTPNGQSIQAKGITPDVMDELAKDEVERLREADLD
RHLSNGKAEDQKRETEAKGVPETKVAPKPGVKPVKSENEEDKNKKRESPAEFGSSDDLLLVQAISYIKENASKRATAKVE
N

Sequences:

>Translated_481_residues
MGDKMRQFGLVIFGAIAGVMLSLNFSAVANKEPQGVLHPLPVEELRAFTEVFGRIKNDYVEPVEDKKLITEAINGMLTGL
DPHSAYLDADAFKELQIGTQGEFGGLGIEVSMEDGFVKVISPIEDTPAFRAGIKPGDLIIKLDDTAVKGLSLTEAIKRMR
GKPDTPITLTVVRKGEAKPIVFPLVRAVIRIQSVKSKMIEPGYGYIRITQFQEQTGENLAKAIDKLFKESGGSMKGLVLD
LRNDPGGLLNGAVAVSAAFLPEDSLVVYTDGRSEDAKMKLKASPEFYLRDTKNDYVKRLPAGIKTVPMVTLVNGGSASAS
EIVAGALQDHKRSIVMGTQTFGKGSVQTILPLGNNTAIKLTTARYYTPNGQSIQAKGITPDVMDELAKDEVERLREADLD
RHLSNGKAEDQKRETEAKGVPETKVAPKPGVKPVKSENEEDKNKKRESPAEFGSSDDLLLVQAISYIKENASKRATAKVE
N
>Mature_480_residues
GDKMRQFGLVIFGAIAGVMLSLNFSAVANKEPQGVLHPLPVEELRAFTEVFGRIKNDYVEPVEDKKLITEAINGMLTGLD
PHSAYLDADAFKELQIGTQGEFGGLGIEVSMEDGFVKVISPIEDTPAFRAGIKPGDLIIKLDDTAVKGLSLTEAIKRMRG
KPDTPITLTVVRKGEAKPIVFPLVRAVIRIQSVKSKMIEPGYGYIRITQFQEQTGENLAKAIDKLFKESGGSMKGLVLDL
RNDPGGLLNGAVAVSAAFLPEDSLVVYTDGRSEDAKMKLKASPEFYLRDTKNDYVKRLPAGIKTVPMVTLVNGGSASASE
IVAGALQDHKRSIVMGTQTFGKGSVQTILPLGNNTAIKLTTARYYTPNGQSIQAKGITPDVMDELAKDEVERLREADLDR
HLSNGKAEDQKRETEAKGVPETKVAPKPGVKPVKSENEEDKNKKRESPAEFGSSDDLLLVQAISYIKENASKRATAKVEN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=345, Percent_Identity=26.6666666666667, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52184; Mature: 52052

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKMRQFGLVIFGAIAGVMLSLNFSAVANKEPQGVLHPLPVEELRAFTEVFGRIKNDYV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
EPVEDKKLITEAINGMLTGLDPHSAYLDADAFKELQIGTQGEFGGLGIEVSMEDGFVKVI
CCCHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEE
SPIEDTPAFRAGIKPGDLIIKLDDTAVKGLSLTEAIKRMRGKPDTPITLTVVRKGEAKPI
CCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCC
VFPLVRAVIRIQSVKSKMIEPGYGYIRITQFQEQTGENLAKAIDKLFKESGGSMKGLVLD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
LRNDPGGLLNGAVAVSAAFLPEDSLVVYTDGRSEDAKMKLKASPEFYLRDTKNDYVKRLP
ECCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHHCC
AGIKTVPMVTLVNGGSASASEIVAGALQDHKRSIVMGTQTFGKGSVQTILPLGNNTAIKL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCCEEEE
TTARYYTPNGQSIQAKGITPDVMDELAKDEVERLREADLDRHLSNGKAEDQKRETEAKGV
EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PETKVAPKPGVKPVKSENEEDKNKKRESPAEFGSSDDLLLVQAISYIKENASKRATAKVE
CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
N
C
>Mature Secondary Structure 
GDKMRQFGLVIFGAIAGVMLSLNFSAVANKEPQGVLHPLPVEELRAFTEVFGRIKNDYV
CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
EPVEDKKLITEAINGMLTGLDPHSAYLDADAFKELQIGTQGEFGGLGIEVSMEDGFVKVI
CCCHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEE
SPIEDTPAFRAGIKPGDLIIKLDDTAVKGLSLTEAIKRMRGKPDTPITLTVVRKGEAKPI
CCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCC
VFPLVRAVIRIQSVKSKMIEPGYGYIRITQFQEQTGENLAKAIDKLFKESGGSMKGLVLD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
LRNDPGGLLNGAVAVSAAFLPEDSLVVYTDGRSEDAKMKLKASPEFYLRDTKNDYVKRLP
ECCCCCCHHHHHHHHEEEECCCCCEEEEECCCCCCCEEEEECCCCEEEECCCHHHHHHCC
AGIKTVPMVTLVNGGSASASEIVAGALQDHKRSIVMGTQTFGKGSVQTILPLGNNTAIKL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCCEEEE
TTARYYTPNGQSIQAKGITPDVMDELAKDEVERLREADLDRHLSNGKAEDQKRETEAKGV
EEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PETKVAPKPGVKPVKSENEEDKNKKRESPAEFGSSDDLLLVQAISYIKENASKRATAKVE
CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]