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The map label for this gene is fdx4 [H]

Identifier: 82702107

GI number: 82702107

Start: 1138820

End: 1139131

Strand: Reverse

Name: fdx4 [H]

Synonym: Nmul_A0978

Alternate gene names: 82702107

Gene position: 1139131-1138820 (Counterclockwise)

Preceding gene: 82702108

Following gene: 82702106

Centisome position: 35.77

GC content: 49.36

Gene sequence:

>312_bases
ATGAGCTACTACCATCGGCATGTATTTTTCTGCGTGAACCAGCGTGAACCCGGCACCTTGTGCTGCAATAACTTTGGCGC
CCAGGCAATGCGCGACTATGCCAAAGAGCGTGTAAAGGCACTCAAGCTGGACTCTAAGAACAAGAGGATAAGGATTAATA
ATGCAGGTTGCCTGGACCGTTGCAATGAAGGTCCTGTCATCGTCGTGTATCCTGAAGATGTTTGGTATACCTACGTGGAC
AAGGAGGATATCGATGAAATCATCGAAGAGCACCTGAAAAACGGCCGTGTGGTCGAGCGGTTACGGATCTGA

Upstream 100 bases:

>100_bases
ATCTCGATCGCAAGCAGCGGCGACTGTTGAGCCGCTTGTGGACAGAAATTAAACTGCGATAATCGTTATAATTTCTGCTC
ATCCATTCAATACAAAAACC

Downstream 100 bases:

>100_bases
TCTCGGTGTATGATACTGCTCCTTCGATTCACGATTTCATGTCTATCCGTTGACTGCGCATAATTCCCAAACCCTGTCCA
GAAACCTGTTCATCGACGGC

Product: putative ferredoxin 2fe-2s protein

Products: NA

Alternate protein names: AaFd4 [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSYYHRHVFFCVNQREPGTLCCNNFGAQAMRDYAKERVKALKLDSKNKRIRINNAGCLDRCNEGPVIVVYPEDVWYTYVD
KEDIDEIIEEHLKNGRVVERLRI

Sequences:

>Translated_103_residues
MSYYHRHVFFCVNQREPGTLCCNNFGAQAMRDYAKERVKALKLDSKNKRIRINNAGCLDRCNEGPVIVVYPEDVWYTYVD
KEDIDEIIEEHLKNGRVVERLRI
>Mature_102_residues
SYYHRHVFFCVNQREPGTLCCNNFGAQAMRDYAKERVKALKLDSKNKRIRINNAGCLDRCNEGPVIVVYPEDVWYTYVDK
EDIDEIIEEHLKNGRVVERLRI

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12181; Mature: 12050

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYHRHVFFCVNQREPGTLCCNNFGAQAMRDYAKERVKALKLDSKNKRIRINNAGCLDR
CCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
CNEGPVIVVYPEDVWYTYVDKEDIDEIIEEHLKNGRVVERLRI
CCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHCCCHHHEECC
>Mature Secondary Structure 
SYYHRHVFFCVNQREPGTLCCNNFGAQAMRDYAKERVKALKLDSKNKRIRINNAGCLDR
CCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
CNEGPVIVVYPEDVWYTYVDKEDIDEIIEEHLKNGRVVERLRI
CCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320; 10441520; 10884354; 12089152 [H]