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The map label for this gene is yliI [H]

Identifier: 82702088

GI number: 82702088

Start: 1112791

End: 1114050

Strand: Reverse

Name: yliI [H]

Synonym: Nmul_A0959

Alternate gene names: 82702088

Gene position: 1114050-1112791 (Counterclockwise)

Preceding gene: 82702090

Following gene: 82702086

Centisome position: 34.99

GC content: 54.84

Gene sequence:

>1260_bases
ATGATCAAACCCTTTTCTGCCCTGCTTGCCTTGGTCTTCGCCACTGGTCTTGGGGCACCGGAGGCTTTTGCACAGTTGCA
AACCCGGATCGTTGCAAACGGCCTTGATCGCCCTTTGTTCGCAACATCGCCAGCAGGAGACTCACGCCTGTTCATTGTCG
AACAGGGCGGGTTGATCAAAATCCTCCAGAATGGGAGTGTGCAGCCAACACCATTTCTCGATCTGTCAGGCTCGGTCAAT
ACCGAGGGCGAACGCGGCCTGCTGGGAATGACATTCGATCCAAACTTTGCCAGCAACCGTCGATTTTATGTCGATTACAT
AGACAGGACTTCGCTCAATACCGTAGTCGCAACGTATCAGGTAAGTGCAACGCAGCCAAACGTGGCAGATATCACCAGCC
GACAAACAGTGCTCACTGTGCAGCAACCTGAGTTCAACAATCACAAGGCCGGGTGGCTCGGCTTCAGGCCCGGCGAGCCG
GGGAATCTTTACATAGCCACAGGAGACGGCGGCCTCCGGGATGATCCTGGTAACCGCGCGCAAAACCTGTCCAGCAATCT
CGGCAAAATTTTGCGAATCGATGTTTCATCTGATCGCCTGCCCAATGATCCCACGCAGTATGGCTATGCAATACCGGATG
GAAATGCCACAGGCAGCAATCCGGAGATATATGCATCTGGATTGCGTAACCCGTTTCGTGACAGTTTTGACCGGGAAAAC
GGCACTTTCTACATCGGTGACGTCGGGCAGAACGCACGCGAGGAAATCGATATAGGCGCTGCCGGAGCGAACTATGGGTG
GCGCAGATTCGAGGGAACGCTGGTGAATTTTCCTAACGATCCACAGATTCCCAACCACACGCCGCCCATCTTTGAATATA
ACCATACCGCGGATGGCGCCTCAGTCATTGGCGGCTATGTCTACCGCGGCTCAGAAATCCCCGGCCTGGAAGGCACCTAC
TTCTTTGCGGACTTCGTCAACGACAAGGTGATGTCCTTCCGCTTTACTGGCTCAGGCATTACCGACCTCACCGACCGCAC
TGCCGAACTGCTCTCCCCAACGGGCATTTCGGGGAATATCACCTCATTCGGCGAGGATGCTTCCGGCAACCTTTATCTGG
TAAGCCTCAATGGGCAAGTCGGACGAATCGCCCTTATACCCGAACCTGCAAGCTACGCAATGATGCTGGCGGGGATGGGT
TTGATCGGGGTGTGGGTTAGGCGAAGAGGGAAAGCGAGGAAAGTCCCAGGGCTCACCTAA

Upstream 100 bases:

>100_bases
TTGACAGCGAACTTTGCCTTTTCTATACATAAGTTGGCCTTCGCATTATTTCCGCTATTGACTCGATTGATTTCAACTCT
AACCGGTCCCGAAGGTTGAC

Downstream 100 bases:

>100_bases
GTCTCTGCGATAGTGGCATGCGGTTCTGGCAACAAAAGGCAGGTCCTGCAGATAGCTATTTGGACGTTTTAATCTACATC
TCACTCATCCACGTTTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MIKPFSALLALVFATGLGAPEAFAQLQTRIVANGLDRPLFATSPAGDSRLFIVEQGGLIKILQNGSVQPTPFLDLSGSVN
TEGERGLLGMTFDPNFASNRRFYVDYIDRTSLNTVVATYQVSATQPNVADITSRQTVLTVQQPEFNNHKAGWLGFRPGEP
GNLYIATGDGGLRDDPGNRAQNLSSNLGKILRIDVSSDRLPNDPTQYGYAIPDGNATGSNPEIYASGLRNPFRDSFDREN
GTFYIGDVGQNAREEIDIGAAGANYGWRRFEGTLVNFPNDPQIPNHTPPIFEYNHTADGASVIGGYVYRGSEIPGLEGTY
FFADFVNDKVMSFRFTGSGITDLTDRTAELLSPTGISGNITSFGEDASGNLYLVSLNGQVGRIALIPEPASYAMMLAGMG
LIGVWVRRRGKARKVPGLT

Sequences:

>Translated_419_residues
MIKPFSALLALVFATGLGAPEAFAQLQTRIVANGLDRPLFATSPAGDSRLFIVEQGGLIKILQNGSVQPTPFLDLSGSVN
TEGERGLLGMTFDPNFASNRRFYVDYIDRTSLNTVVATYQVSATQPNVADITSRQTVLTVQQPEFNNHKAGWLGFRPGEP
GNLYIATGDGGLRDDPGNRAQNLSSNLGKILRIDVSSDRLPNDPTQYGYAIPDGNATGSNPEIYASGLRNPFRDSFDREN
GTFYIGDVGQNAREEIDIGAAGANYGWRRFEGTLVNFPNDPQIPNHTPPIFEYNHTADGASVIGGYVYRGSEIPGLEGTY
FFADFVNDKVMSFRFTGSGITDLTDRTAELLSPTGISGNITSFGEDASGNLYLVSLNGQVGRIALIPEPASYAMMLAGMG
LIGVWVRRRGKARKVPGLT
>Mature_419_residues
MIKPFSALLALVFATGLGAPEAFAQLQTRIVANGLDRPLFATSPAGDSRLFIVEQGGLIKILQNGSVQPTPFLDLSGSVN
TEGERGLLGMTFDPNFASNRRFYVDYIDRTSLNTVVATYQVSATQPNVADITSRQTVLTVQQPEFNNHKAGWLGFRPGEP
GNLYIATGDGGLRDDPGNRAQNLSSNLGKILRIDVSSDRLPNDPTQYGYAIPDGNATGSNPEIYASGLRNPFRDSFDREN
GTFYIGDVGQNAREEIDIGAAGANYGWRRFEGTLVNFPNDPQIPNHTPPIFEYNHTADGASVIGGYVYRGSEIPGLEGTY
FFADFVNDKVMSFRFTGSGITDLTDRTAELLSPTGISGNITSFGEDASGNLYLVSLNGQVGRIALIPEPASYAMMLAGMG
LIGVWVRRRGKARKVPGLT

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=396, Percent_Identity=38.8888888888889, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI187936953, Length=392, Percent_Identity=40.8163265306122, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI187936955, Length=389, Percent_Identity=40.6169665809769, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI20143973, Length=364, Percent_Identity=30.7692307692308, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI1787060, Length=383, Percent_Identity=25.065274151436, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45196; Mature: 45196

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPFSALLALVFATGLGAPEAFAQLQTRIVANGLDRPLFATSPAGDSRLFIVEQGGLIK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEE
ILQNGSVQPTPFLDLSGSVNTEGERGLLGMTFDPNFASNRRFYVDYIDRTSLNTVVATYQ
EEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEE
VSATQPNVADITSRQTVLTVQQPEFNNHKAGWLGFRPGEPGNLYIATGDGGLRDDPGNRA
EECCCCCHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHH
QNLSSNLGKILRIDVSSDRLPNDPTQYGYAIPDGNATGSNPEIYASGLRNPFRDSFDREN
HHHHHCCCEEEEEEECCCCCCCCCHHCCEECCCCCCCCCCCCEEECCCCCHHHHHCCCCC
GTFYIGDVGQNAREEIDIGAAGANYGWRRFEGTLVNFPNDPQIPNHTPPIFEYNHTADGA
CEEEEECCCCCCHHHEEECCCCCCCCCEEECCEEEECCCCCCCCCCCCCCEEECCCCCCH
SVIGGYVYRGSEIPGLEGTYFFADFVNDKVMSFRFTGSGITDLTDRTAELLSPTGISGNI
HHHCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
TSFGEDASGNLYLVSLNGQVGRIALIPEPASYAMMLAGMGLIGVWVRRRGKARKVPGLT
CCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIKPFSALLALVFATGLGAPEAFAQLQTRIVANGLDRPLFATSPAGDSRLFIVEQGGLIK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEE
ILQNGSVQPTPFLDLSGSVNTEGERGLLGMTFDPNFASNRRFYVDYIDRTSLNTVVATYQ
EEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEE
VSATQPNVADITSRQTVLTVQQPEFNNHKAGWLGFRPGEPGNLYIATGDGGLRDDPGNRA
EECCCCCHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHH
QNLSSNLGKILRIDVSSDRLPNDPTQYGYAIPDGNATGSNPEIYASGLRNPFRDSFDREN
HHHHHCCCEEEEEEECCCCCCCCCHHCCEECCCCCCCCCCCCEEECCCCCHHHHHCCCCC
GTFYIGDVGQNAREEIDIGAAGANYGWRRFEGTLVNFPNDPQIPNHTPPIFEYNHTADGA
CEEEEECCCCCCHHHEEECCCCCCCCCEEECCEEEECCCCCCCCCCCCCCEEECCCCCCH
SVIGGYVYRGSEIPGLEGTYFFADFVNDKVMSFRFTGSGITDLTDRTAELLSPTGISGNI
HHHCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
TSFGEDASGNLYLVSLNGQVGRIALIPEPASYAMMLAGMGLIGVWVRRRGKARKVPGLT
CCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]