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The map label for this gene is 82702086

Identifier: 82702086

GI number: 82702086

Start: 1109884

End: 1111026

Strand: Reverse

Name: 82702086

Synonym: Nmul_A0957

Alternate gene names: NA

Gene position: 1111026-1109884 (Counterclockwise)

Preceding gene: 82702088

Following gene: 82702085

Centisome position: 34.89

GC content: 56.08

Gene sequence:

>1143_bases
TTGCCCTCCTGTGCCAGAGCAGATAATGTTCTGCCCTTTGCGTTAACGGTTCCGGAATTTCCATCCTTGACTACTCCCTC
CACCAGACACGAACTGCTGCACGACATCCTCAAGCAGGTTTCCCGTTCGTTTTATCTCACGCTCAATGTGCTGCCTATCG
GAGTGCGCGAGCAGATGGGCCTGGCGTATCTGTTTGCGCGTGCCGCCGATACCATTGCCGACACGGATCTGATCGACCGG
GCAGAGCGTCTGAAATACCTGAACCAGTTCCGTGAGCAATTCATGACGGCCAGGATTGATCGGAAAGCCGTTCAGGAGAT
TCAGAGCGCGCTGGTCCCTCATCAGAAAGACTCGGGAGAAAGCATTCTTCTGCAGCGGCTAGAGGATTGTTTCAGGCTGT
ACGAGGAGTGCTCGCCCGATGACCGGAAGCGCATCCAGTGGGTTATAAAGGTACTCACCGAAGGGATGGAAATGGACTTG
AACCGCTTCCCCGGCCAGTCAGGTAACCAACTTGCAGCGCTATCCACTCTGGACGACCTGGACCAGTACACTTACCATGT
CGCAGGTTGTGTCGGGGATTTCTGGACCAGGATGATTTGTGCTCATCGGCCGACGATGGGACGATGGGATGTGGAGGAGA
TGGCAGCCATCGGGGTAAGGTTCGGGAAAGGGCTGCAACTCACCAACATTCTGAAGGATATCGGCCGGGACCTGCACAAT
GGCCGCTGTTATATTCCCGAATCGCTTCTCGATGAGGCAGGCCTGAAGCCCGCGAACCTGTTGAATGACAGCAGCCTGCC
AAAATTCAAACCGGTTCTCGACCGCCTCATCAGGATGGCCATCGAGCACCTGGATCAAGGCTGGATTTATACCATGGCGA
TTCCTGTCTCGGAAATTCGTCAACGGCTGGCCTGCATCTGGCCTATCCTGCTGGCCGGGGAAACCCTACGGCGTGTCGCG
GTGACGCCCGATCTGCTCGACCCCGCCGTGTATGTCAAAGCGCCTCGAAGCGAGGTATACCGGATAATGACATTGACAAC
CCTGACCTGCGCCAACGGCTTTGTTGCAACCAGTTACTGGAACCGAGTCCGGGAACAGGTTGTCTCAGCCGTAGAGCAAT
CACAGCAGAGCCGGCTGGCGTAA

Upstream 100 bases:

>100_bases
CTTTTTTAGATTACCCCTGCTCCTGATCGCCTCCAAAAGATACTTGGGTCTGATCAGTACTTGTGCAGAGGGGATTCAAC
TCTTTTCTTAACAAGTTATC

Downstream 100 bases:

>100_bases
CATGCAAATATTAACTGTCGCTGCCGCGTTTCATCCTTGAAGTCAAAAAAATCGAAAACGTTTTTGTGCCAGATACTCCC
GACAATCTTTCTTTCCTGCC

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: Farnesyl-Diphosphate Farnesyltransferase; Squalene Synthase; Squalene/Phytoene Synthase Family Protein; Phytoene Synthase; Squalene And Phytoene Synthase; Squalene Synthetase; Phytoene/Squalene Synthetase Family Protein; Phytoene/Squalene Synthetase

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPSCARADNVLPFALTVPEFPSLTTPSTRHELLHDILKQVSRSFYLTLNVLPIGVREQMGLAYLFARAADTIADTDLIDR
AERLKYLNQFREQFMTARIDRKAVQEIQSALVPHQKDSGESILLQRLEDCFRLYEECSPDDRKRIQWVIKVLTEGMEMDL
NRFPGQSGNQLAALSTLDDLDQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEEMAAIGVRFGKGLQLTNILKDIGRDLHN
GRCYIPESLLDEAGLKPANLLNDSSLPKFKPVLDRLIRMAIEHLDQGWIYTMAIPVSEIRQRLACIWPILLAGETLRRVA
VTPDLLDPAVYVKAPRSEVYRIMTLTTLTCANGFVATSYWNRVREQVVSAVEQSQQSRLA

Sequences:

>Translated_380_residues
MPSCARADNVLPFALTVPEFPSLTTPSTRHELLHDILKQVSRSFYLTLNVLPIGVREQMGLAYLFARAADTIADTDLIDR
AERLKYLNQFREQFMTARIDRKAVQEIQSALVPHQKDSGESILLQRLEDCFRLYEECSPDDRKRIQWVIKVLTEGMEMDL
NRFPGQSGNQLAALSTLDDLDQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEEMAAIGVRFGKGLQLTNILKDIGRDLHN
GRCYIPESLLDEAGLKPANLLNDSSLPKFKPVLDRLIRMAIEHLDQGWIYTMAIPVSEIRQRLACIWPILLAGETLRRVA
VTPDLLDPAVYVKAPRSEVYRIMTLTTLTCANGFVATSYWNRVREQVVSAVEQSQQSRLA
>Mature_379_residues
PSCARADNVLPFALTVPEFPSLTTPSTRHELLHDILKQVSRSFYLTLNVLPIGVREQMGLAYLFARAADTIADTDLIDRA
ERLKYLNQFREQFMTARIDRKAVQEIQSALVPHQKDSGESILLQRLEDCFRLYEECSPDDRKRIQWVIKVLTEGMEMDLN
RFPGQSGNQLAALSTLDDLDQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEEMAAIGVRFGKGLQLTNILKDIGRDLHNG
RCYIPESLLDEAGLKPANLLNDSSLPKFKPVLDRLIRMAIEHLDQGWIYTMAIPVSEIRQRLACIWPILLAGETLRRVAV
TPDLLDPAVYVKAPRSEVYRIMTLTTLTCANGFVATSYWNRVREQVVSAVEQSQQSRLA

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321984, Length=291, Percent_Identity=28.8659793814433, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43196; Mature: 43065

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSCARADNVLPFALTVPEFPSLTTPSTRHELLHDILKQVSRSFYLTLNVLPIGVREQMG
CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHH
LAYLFARAADTIADTDLIDRAERLKYLNQFREQFMTARIDRKAVQEIQSALVPHQKDSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SILLQRLEDCFRLYEECSPDDRKRIQWVIKVLTEGMEMDLNRFPGQSGNQLAALSTLDDL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEHHHHHHHH
DQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEEMAAIGVRFGKGLQLTNILKDIGRDLHN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GRCYIPESLLDEAGLKPANLLNDSSLPKFKPVLDRLIRMAIEHLDQGWIYTMAIPVSEIR
CCEECCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
QRLACIWPILLAGETLRRVAVTPDLLDPAVYVKAPRSEVYRIMTLTTLTCANGFVATSYW
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHH
NRVREQVVSAVEQSQQSRLA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSCARADNVLPFALTVPEFPSLTTPSTRHELLHDILKQVSRSFYLTLNVLPIGVREQMG
CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHHH
LAYLFARAADTIADTDLIDRAERLKYLNQFREQFMTARIDRKAVQEIQSALVPHQKDSGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
SILLQRLEDCFRLYEECSPDDRKRIQWVIKVLTEGMEMDLNRFPGQSGNQLAALSTLDDL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEHHHHHHHH
DQYTYHVAGCVGDFWTRMICAHRPTMGRWDVEEMAAIGVRFGKGLQLTNILKDIGRDLHN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GRCYIPESLLDEAGLKPANLLNDSSLPKFKPVLDRLIRMAIEHLDQGWIYTMAIPVSEIR
CCEECCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
QRLACIWPILLAGETLRRVAVTPDLLDPAVYVKAPRSEVYRIMTLTTLTCANGFVATSYW
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHEEECCHHHHHHHHHHHHHHHCCCCHHHHHH
NRVREQVVSAVEQSQQSRLA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA