| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is macB1 [H]
Identifier: 82702082
GI number: 82702082
Start: 1104993
End: 1106201
Strand: Direct
Name: macB1 [H]
Synonym: Nmul_A0953
Alternate gene names: 82702082
Gene position: 1104993-1106201 (Clockwise)
Preceding gene: 82702081
Following gene: 82702083
Centisome position: 34.7
GC content: 57.73
Gene sequence:
>1209_bases GTGAAGCTTCGTGACACGTTGAGTCTCTCCATCAGAACCGTTGCCAGCTACCGCACCCGTTCGTTGCTCATCATTCTGGC AATGTCATTGGGGGTGGCGGCAGTGGTCGTACTAACCGCCTTGGGAGATGGCGCCCGTGGCTACGTGGTTCAGCAGTTTT CATCCGTCGGAACCAATCTCATCATCGTCTTGCCCGGTCGTGCCGAAACTTCCGGGGGCCTCCCTGGTGCAGCGTTGGGG CAGACTCCGCGCGACCTGACGCTGGAAGATGCTCGCTCGCTTGTCCATCTGCCGCAAATCAGGCGGTATGCGCCGCTCAA CGTCGGTGTTGCCGAACTTGCTTCCGCCGGTCGCCTGCGCGAAGTGACGGTGCTGGGAAGCACGGCGGCTATACTGCCGA TAAGGCATATGGATCTCGCGCAGGGCAGTTTTCTTGCGCGAGAAAAAGGAAGCGAGCGCAGCGCGCAAATCGTTCTGGGT GCACAGCTCGCACAGGAGTTCTTTCCCCAAAGCAGTCCTATCGGTCAGCGGGTAAGACTGGGTGACCGGCGCTTTCTCGT TTCCGGCGTGCTCGCGCCGCAAGGCGAAACGATGGGCTTCAATACCGATGAAATCGTCATCATTCCTATCGATTATGCCC AGGCCTTGTTCAACACATCGTCCCTTTTCCGTATTCTCGTCGAAACCAGAAGCCGCAGCGACCTTTTGCCCGTCAAAGAA GCAATTCGCGACATTTTAAAGCAGCGACACGATGGGGAAGAGGACATCACCATAATTACACACGATGCCGTACTTGCCAC TTTTGATCGCATTCTGCGGGCGTTGACGCTTGGTGTAGCGGGAATCGCCGCTATCAGTCTGGCGGTAGCCGGCATATTGG TAATGAATGTCATGCTGGTGTCGGTCAGTCAGCGCACCTCCGAAGTCGGTTTGTTGAAAGCCCTCGGCGCGCCGTCCTCT GAAATCCACCGTTTGTTTCTTGCCGAGGCGTTGTGGCTGTCATTGGCGGGCGGGATAGCGGGATTCGCATTGGGACAATT TGGTAGCCTGCTGATCCGACTGGCTTATCCGCAGCTTCCTGCCTGGCCGCCCCTATGGGCTAATGTTGCCGGGGTGGGAG TGGCCTTTATAACAGGTTTGCTCGCCAGCCTTTTACCGGCAGCGCGTGCCGCCAGGCTCGATCCCGTGCGCGCACTGAGT GGAAAATAA
Upstream 100 bases:
>100_bases TCAGGATGATGCGAAGGCTGCAAAGCGTGGTTTGTGGGCGGATCCCTATTCAAAGCCGCCATGGAAATGGCGCGAAGTGT GGAAGGAATGAAGATTTGAC
Downstream 100 bases:
>100_bases GCGGAGATGAGGAAATGGATATAAAAAGGGTATGAAAGGAGCGGCATGAGCGTTATCGATACGCTGCGTTTCGCCCTGCG CTCGCTCACCGCACATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKLRDTLSLSIRTVASYRTRSLLIILAMSLGVAAVVVLTALGDGARGYVVQQFSSVGTNLIIVLPGRAETSGGLPGAALG QTPRDLTLEDARSLVHLPQIRRYAPLNVGVAELASAGRLREVTVLGSTAAILPIRHMDLAQGSFLAREKGSERSAQIVLG AQLAQEFFPQSSPIGQRVRLGDRRFLVSGVLAPQGETMGFNTDEIVIIPIDYAQALFNTSSLFRILVETRSRSDLLPVKE AIRDILKQRHDGEEDITIITHDAVLATFDRILRALTLGVAGIAAISLAVAGILVMNVMLVSVSQRTSEVGLLKALGAPSS EIHRLFLAEALWLSLAGGIAGFALGQFGSLLIRLAYPQLPAWPPLWANVAGVGVAFITGLLASLLPAARAARLDPVRALS GK
Sequences:
>Translated_402_residues MKLRDTLSLSIRTVASYRTRSLLIILAMSLGVAAVVVLTALGDGARGYVVQQFSSVGTNLIIVLPGRAETSGGLPGAALG QTPRDLTLEDARSLVHLPQIRRYAPLNVGVAELASAGRLREVTVLGSTAAILPIRHMDLAQGSFLAREKGSERSAQIVLG AQLAQEFFPQSSPIGQRVRLGDRRFLVSGVLAPQGETMGFNTDEIVIIPIDYAQALFNTSSLFRILVETRSRSDLLPVKE AIRDILKQRHDGEEDITIITHDAVLATFDRILRALTLGVAGIAAISLAVAGILVMNVMLVSVSQRTSEVGLLKALGAPSS EIHRLFLAEALWLSLAGGIAGFALGQFGSLLIRLAYPQLPAWPPLWANVAGVGVAFITGLLASLLPAARAARLDPVRALS GK >Mature_402_residues MKLRDTLSLSIRTVASYRTRSLLIILAMSLGVAAVVVLTALGDGARGYVVQQFSSVGTNLIIVLPGRAETSGGLPGAALG QTPRDLTLEDARSLVHLPQIRRYAPLNVGVAELASAGRLREVTVLGSTAAILPIRHMDLAQGSFLAREKGSERSAQIVLG AQLAQEFFPQSSPIGQRVRLGDRRFLVSGVLAPQGETMGFNTDEIVIIPIDYAQALFNTSSLFRILVETRSRSDLLPVKE AIRDILKQRHDGEEDITIITHDAVLATFDRILRALTLGVAGIAAISLAVAGILVMNVMLVSVSQRTSEVGLLKALGAPSS EIHRLFLAEALWLSLAGGIAGFALGQFGSLLIRLAYPQLPAWPPLWANVAGVGVAFITGLLASLLPAARAARLDPVRALS GK
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=416, Percent_Identity=30.0480769230769, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 42678; Mature: 42678
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRDTLSLSIRTVASYRTRSLLIILAMSLGVAAVVVLTALGDGARGYVVQQFSSVGTNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEE IIVLPGRAETSGGLPGAALGQTPRDLTLEDARSLVHLPQIRRYAPLNVGVAELASAGRLR EEEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEE EVTVLGSTAAILPIRHMDLAQGSFLAREKGSERSAQIVLGAQLAQEFFPQSSPIGQRVRL EEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHC GDRRFLVSGVLAPQGETMGFNTDEIVIIPIDYAQALFNTSSLFRILVETRSRSDLLPVKE CCCCEEECCEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AIRDILKQRHDGEEDITIITHDAVLATFDRILRALTLGVAGIAAISLAVAGILVMNVMLV HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVSQRTSEVGLLKALGAPSSEIHRLFLAEALWLSLAGGIAGFALGQFGSLLIRLAYPQLP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWPPLWANVAGVGVAFITGLLASLLPAARAARLDPVRALSGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MKLRDTLSLSIRTVASYRTRSLLIILAMSLGVAAVVVLTALGDGARGYVVQQFSSVGTNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEE IIVLPGRAETSGGLPGAALGQTPRDLTLEDARSLVHLPQIRRYAPLNVGVAELASAGRLR EEEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEE EVTVLGSTAAILPIRHMDLAQGSFLAREKGSERSAQIVLGAQLAQEFFPQSSPIGQRVRL EEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHC GDRRFLVSGVLAPQGETMGFNTDEIVIIPIDYAQALFNTSSLFRILVETRSRSDLLPVKE CCCCEEECCEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AIRDILKQRHDGEEDITIITHDAVLATFDRILRALTLGVAGIAAISLAVAGILVMNVMLV HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVSQRTSEVGLLKALGAPSSEIHRLFLAEALWLSLAGGIAGFALGQFGSLLIRLAYPQLP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AWPPLWANVAGVGVAFITGLLASLLPAARAARLDPVRALSGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA