Click here to switch to the map view.

The map label for this gene is ytfH [C]

Identifier: 82702076

GI number: 82702076

Start: 1098149

End: 1098571

Strand: Direct

Name: ytfH [C]

Synonym: Nmul_A0947

Alternate gene names: 82702076

Gene position: 1098149-1098571 (Clockwise)

Preceding gene: 82702073

Following gene: 82702077

Centisome position: 34.49

GC content: 50.59

Gene sequence:

>423_bases
GTGACAGGGGGTGCGGAAGCCGGTGATGGCATAATATTCAAGCGCTCCTCATGTCCCATTACCAATGGATTGAATATTTT
TGGCGACAAATGGACGCTTCTGGTCATTCGCGACCTGGTGCTCGGTAAACGCCGTTATGCCGATTTTATCTCTTCGCCGG
AAAATATCGCCTCGAACATCCTTGCCGATCGCTTGAAGAGACTGGAGACGGCGGGCCTCGTCTGCCGGCGGGTATATCAA
CAGAAACCCGTTCGCTACGAATACGTTCTCACAGAGAAGGGCAATGATCTCAAGCCCGTTCTGGAAGCAATAAGCAGATG
GGGCAAGAAGCACTGTCCTGGCACCGATGTGTTTCGCCCTGTCGATCCACCCGCATTACCAGTTTCAAAAACAGGAAGTA
CAAATAGCGATTTTAATGATTGA

Upstream 100 bases:

>100_bases
CCTCTCATCAGCTCGTCTTGGCATGGGCCTGCAGCCTAACCTACTATGTTGCGAATTGCAAGTGACTATAATAAGTTATG
GGTGGAGGAAGGAGAAAGCT

Downstream 100 bases:

>100_bases
ATGAATATTCTAAAACTGTCTCTTCGCATGCTTGCGCGCGACTGGCGCGCGGGCGAGTTGCGCGTGCTGGTATTTGCGCT
GCTCATTGCAGTGGGTGGGA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFISSPENIASNILADRLKRLETAGLVCRRVYQ
QKPVRYEYVLTEKGNDLKPVLEAISRWGKKHCPGTDVFRPVDPPALPVSKTGSTNSDFND

Sequences:

>Translated_140_residues
MTGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFISSPENIASNILADRLKRLETAGLVCRRVYQ
QKPVRYEYVLTEKGNDLKPVLEAISRWGKKHCPGTDVFRPVDPPALPVSKTGSTNSDFND
>Mature_139_residues
TGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFISSPENIASNILADRLKRLETAGLVCRRVYQQ
KPVRYEYVLTEKGNDLKPVLEAISRWGKKHCPGTDVFRPVDPPALPVSKTGSTNSDFND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15538; Mature: 15407

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFISSPENIASNI
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LADRLKRLETAGLVCRRVYQQKPVRYEYVLTEKGNDLKPVLEAISRWGKKHCPGTDVFRP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC
VDPPALPVSKTGSTNSDFND
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFISSPENIASNI
CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LADRLKRLETAGLVCRRVYQQKPVRYEYVLTEKGNDLKPVLEAISRWGKKHCPGTDVFRP
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC
VDPPALPVSKTGSTNSDFND
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]