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The map label for this gene is rbcL [H]

Identifier: 82701819

GI number: 82701819

Start: 787189

End: 788658

Strand: Reverse

Name: rbcL [H]

Synonym: Nmul_A0686

Alternate gene names: 82701819

Gene position: 788658-787189 (Counterclockwise)

Preceding gene: 82701821

Following gene: 82701818

Centisome position: 24.77

GC content: 57.41

Gene sequence:

>1470_bases
ATGAGTGAAGCAATTACCGGCGCCGAGCGATACAAATCTGGCGTAATTCCCTACAAGAAAATGGGTTACTGGGAACCTGA
CTATGTACCCAAGGATACCGACATTATCGCCATGTTCCGTATCACCCCCCAGGCAGGAGTGGAGCCTGAGGAAGCCGCAG
CGGCGGTAGCCGGTGAATCTTCCACCGCGACCTGGACCGTTGTGTGGACCGATCGGCTGACCGCGTGCGAACTGTATCGC
GCGAAAGCTTTCCGTACCGATCCCGTGCCCAATACTGGCGAAGGCACCAAGACTGAACAGCAGTATTTCGCCTACATCGC
CTATGATCTTGATTTGTTCGAGCCGGGTTCCATCGCCAACCTGACCGCCTCCATCATCGGCAACGTGTTCGGCTTCAAGG
CTGTGAAAGCTTTGCGTCTGGAAGACATGCGTATCCCGGTGGCTTATCTGAAGACTTTTCAGGGTCCCGCAACCGGTATC
ATCGTGGAGCGCGAGCGTCTCGATAAATTTGGCAGGCCGCTGCTGGGCGCGACGACCAAGCCGAAACTGGGGCTTTCCGG
CCGCAACTATGGCCGCGTGGTATACGAAGGACTCAAGGGTGGTCTCGACTTCATGAAAGATGACGAGAACATCAACTCGC
AACCCTTCATGCACTGGCGTGACCGCTTCCTGTACTGTATGGAAGCAGTCAACAAGGCTTCAGCCGCTACCGGCGAAGTC
AAGGGCCACTACCTGAACGTTACCGCCGGCACCATGGAAGAGATGTACGAGCGCGCGGAATTCGCCAAGTCGCTCGGCTC
CGTCATCATCATGATCGACCTGGTGATCGGCTATACCGCCATTCAATCGATGGCGAAGTGGGCGCGCAAGAACGACATGA
TTCTGCACCTGCACCGTGCCGGCAACTCCACCTACTCGCGCCAGAAGAACCATGGCATGAACTTCCGTGTCATCTGCAAG
TGGATGCGGATGGCGGGTGTAGACCATATCCATGCAGGCACTGTCGTGGGCAAACTGGAAGGCGATCCCCTCATGATCAA
GGGCTTCTACGACACCCTGCGCGACCGTCACACACCGGTAAGCCTGGAGCACGGACTGTTCTTCGAGCAGGATTGGGCTT
CGCTGAACAAGGTCATGCCGGTTGCTTCGGGCGGTATCCATGCTGGCCAGATGCACCAGTTGCTGGATTACCTCGGCGAA
GACGTGATACTGCAGTTTGGCGGTGGCACCATCGGACACCCGCAAGGCATTCAGGCGGGCGCGGTCGCCAACCGGGTCGC
GCTGGAGGCAATGATCATGGCGCGCAACGAAGGGCGCGACTATGTGAAGGAAGGTCCTCAGATTCTGGAAGAAGCCGCCA
AGTGGTGCACCCCGCTCAAGCTGGCGCTGGATACATGGAAGGACATCACCTTCAACTATGAATCCACCGACACCGCCGAC
TTTGTGCCGAGCGAAACAGCCAGCGTTTAA

Upstream 100 bases:

>100_bases
ATCTTATCATAACAATCAAAACATGTGACTGTTATTTATAGTAATATCGATTACAATTCTTTTTGTAGCACCTTTATCTA
CCCTTATGAGGAGAACTGCC

Downstream 100 bases:

>100_bases
TCGTATCAAGGAGAAACCATATTATGATGACCAATTTTCAAAACCGTCTCACGCAAGGGCAATTTTCTTTTCTGCCCCCG
CTGACGGATAAGCAGATTTC

Product: ribulose bisophosphate carboxylase

Products: NA

Alternate protein names: RuBisCO large subunit [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MSEAITGAERYKSGVIPYKKMGYWEPDYVPKDTDIIAMFRITPQAGVEPEEAAAAVAGESSTATWTVVWTDRLTACELYR
AKAFRTDPVPNTGEGTKTEQQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGI
IVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEV
KGHYLNVTAGTMEEMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICK
WMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPVSLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGE
DVILQFGGGTIGHPQGIQAGAVANRVALEAMIMARNEGRDYVKEGPQILEEAAKWCTPLKLALDTWKDITFNYESTDTAD
FVPSETASV

Sequences:

>Translated_489_residues
MSEAITGAERYKSGVIPYKKMGYWEPDYVPKDTDIIAMFRITPQAGVEPEEAAAAVAGESSTATWTVVWTDRLTACELYR
AKAFRTDPVPNTGEGTKTEQQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGI
IVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEV
KGHYLNVTAGTMEEMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICK
WMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPVSLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGE
DVILQFGGGTIGHPQGIQAGAVANRVALEAMIMARNEGRDYVKEGPQILEEAAKWCTPLKLALDTWKDITFNYESTDTAD
FVPSETASV
>Mature_488_residues
SEAITGAERYKSGVIPYKKMGYWEPDYVPKDTDIIAMFRITPQAGVEPEEAAAAVAGESSTATWTVVWTDRLTACELYRA
KAFRTDPVPNTGEGTKTEQQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGII
VERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVK
GHYLNVTAGTMEEMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKW
MRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPVSLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGED
VILQFGGGTIGHPQGIQAGAVANRVALEAMIMARNEGRDYVKEGPQILEEAAKWCTPLKLALDTWKDITFNYESTDTADF
VPSETASV

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR020888
- InterPro:   IPR000685
- InterPro:   IPR017443
- InterPro:   IPR017444 [H]

Pfam domain/function: PF00016 RuBisCO_large; PF02788 RuBisCO_large_N [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 54316; Mature: 54185

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAITGAERYKSGVIPYKKMGYWEPDYVPKDTDIIAMFRITPQAGVEPEEAAAAVAGES
CCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC
STATWTVVWTDRLTACELYRAKAFRTDPVPNTGEGTKTEQQYFAYIAYDLDLFEPGSIAN
CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCHHH
LTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIIVERERLDKFGRPLLGATTK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCC
PKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEV
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KGHYLNVTAGTMEEMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRA
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
GNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPV
CCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCCEEEEEHHHHHHCCCCCC
SLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGEDVILQFGGGTIGHPQGIQAG
EECCCCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
AVANRVALEAMIMARNEGRDYVKEGPQILEEAAKWCTPLKLALDTWKDITFNYESTDTAD
HHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHCEEEECCCCCCCC
FVPSETASV
CCCCCCCCC
>Mature Secondary Structure 
SEAITGAERYKSGVIPYKKMGYWEPDYVPKDTDIIAMFRITPQAGVEPEEAAAAVAGES
CCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC
STATWTVVWTDRLTACELYRAKAFRTDPVPNTGEGTKTEQQYFAYIAYDLDLFEPGSIAN
CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCHHH
LTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIIVERERLDKFGRPLLGATTK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCC
PKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEV
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KGHYLNVTAGTMEEMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRA
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
GNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPV
CCCCHHHHHHCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCCEEEEEHHHHHHCCCCCC
SLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGEDVILQFGGGTIGHPQGIQAG
EECCCCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
AVANRVALEAMIMARNEGRDYVKEGPQILEEAAKWCTPLKLALDTWKDITFNYESTDTAD
HHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHCEEEECCCCCCCC
FVPSETASV
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA