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The map label for this gene is omp85 [H]

Identifier: 82701798

GI number: 82701798

Start: 760724

End: 763006

Strand: Direct

Name: omp85 [H]

Synonym: Nmul_A0665

Alternate gene names: 82701798

Gene position: 760724-763006 (Clockwise)

Preceding gene: 82701797

Following gene: 82701799

Centisome position: 23.89

GC content: 54.4

Gene sequence:

>2283_bases
ATGAAAGTCAGGTATCTGGTCGCGCTTGTTTCTGCTTTGTGCGCTTCGGCTTCATGGGCACGCGAGCCCTTCGAAGTCAA
GGACATCCGGGTGGAAGGCATACAGCGCACCGAGGCCGGAACCGTGTTCAGTTACCTGCCGGTGAAGGTCGGAGATGTGC
TCGACGACGAAAAGGCGGCGGCGGCGATCAAGGCGCTGTATGCCACCGGTTTTTTCAAGGATGTACGGCTCGAGTCCGAA
AACGGTGTCCTGATCGTGGTGATAGAGGAGCGGCCGGCGATTGCTCAGATCACCATTGTCGGTGCCAAGGAGTTTGAGAA
AGACAAGCTCAAGGAGGGGCTGAAACAGGCAGGTTTGGCGGAATCCCGCATTTTCGATCGCTCGACACTGGAAAAGGCCG
AACAGGAACTCAAGCAGCAGTATATGGCGCGCGGCAAATATGCCGTGAAAATCACCACAACCACTACTCCGCTTGAACGA
AACCGCGTGGGCATTACCTTCCATGTGGACGAAGGCAGGACCGCCAAGATTCGCAAGATCAATATCGTCGGAAATAAAGC
TTTCAAGGAAAAGGATCTGTTGAGCGCGTTCTCGCTGCGGACTCCTGGCCTCTTGACCTGGCTCACCAAGGAAGACCAGT
ATTCGAAGCAGAAGCTCGGCGGCGATCTCGAATCGCTCCGTTCCTATTACCTGAATCGCGGCTACCTCGAATTCAGCATA
GAGTCGACGCAGGTATCGATCACACCCGACATGCAGGATATTTACATTACGGTAAATATCGTCGAGGGCCCTAAATATGA
TGTTTCCGAAATCAAGCTTGCCGGTGAACTGCTGGTTCCGGAAGAGGAACTGCGCAAGCTCATACAACTCTCGCCCGGAG
ACACGTTTTCCCGCGAAAAGCTGACGGAGTCCATCAAGCTCATCACCGACCGGCTCGGCGACGATGGTTACGCATTCGCC
AATGTCAACGCCTCTCCCCAGCTGGACAAGGAAAAGCAGCAGGTGGCGTTCACCTTTTTTATCGATCCCGGCCGTCGCGT
CTATGTCAGACGCATCAATATTACCGGCAACTCCCGAACCCGGGATGAAGTGATACGGCGGGAAATGCGCCAGTTCGAAG
GGGGCTGGTATTCAACCAGCAAGATAAACCGCTCCAAGACCCGGGTCGACAGATTGAATTACTTTACTGCCGTCAATGTT
GAAACTCCGGCGGTTCCCGGTACCACGGACCAGATCGATGTGAATGTCGAAGTCAAGGAAAAGCCGACGGGCGCCGTGAT
GTTCGGTGCGGGCTATTCCAACATGGAAGGACTGATACTGAGCGGGTCTGTTGCGCAGGACAATATATTCGGTACCGGCA
AGTTCGTCAATCTCATGGTGAATACCGGTAGCGTCAACAAGACCTATTCATTGTCCTATACCGACCCCTATTTCACCAAG
GATGGTGTCACGGCAGGACTCGATCTCTATAAGCGGGTGCTCAACACACGCACCTTGTCCTCCGTGATGAATTTCAACAC
CGACACGCTGGGCGCAGGTCTTCGTTTCGGCATTCCCATCAATGAAAATGACAGCATCATGGGGGGGCTGGGAGCGGAAC
AAACCACGATCGATCTTGGGCCTGACAGCCCGCAGCGTAATATCGATTTCGTGAACAAATTCGGGCGGACCACGATCAAC
ATACCTGCAACGCTCAGCTGGAGGCGGGATGGCCGTGACAGCGCAATCTGGACAACTTCGGGAACCACGCAGCGCGTGTT
CGCGGAGGTGGGCCTGCCGGGAGGAGACCTCACTTATTACAAATTGAGTTATGACCTTCGCTGGTATTTCCCCATCACCG
AGATATTTACGCTGATGTTGAATGGGGAACTCGGATATGGGGATGGCTATTCCGGTAAAGAGCTTCCCTTTTTCAAGAAT
TTCTTCGCCGGGGGCAATACCTCCGTGCGGGGTTACAACATCAGTTCGCTGGGTCCCAGGGACGCAACCAACAGAACCTT
GGGAGGCAACAAACGTGCGGTAGGCAATATCGAGGTTCTGTTTCCGATGCCCGGCATGAGGAATGATCGCACAGTACGCC
TGAGCGCGTTTCTGGATGGGGGCACGGTCTGGGGACCTGGTGGGGTAAGACCCGATCAGGAGGGCTTGCGTTATTCTGCC
GGTATCGCCGTTACCTGGATATCTCCTATGGGGCCGCTCAAAATCAGCGTGGCCCAGCCCTTGAATAGCCAGCCCGGCGA
CAACATACAGCGTTTTCAGTTTCAGTTTGGGCAACAATTCTAG

Upstream 100 bases:

>100_bases
AGCGATGGAAATCGGTCAGCAGGTGGGGATGGCACTCTTGTTTGCCCTGATGGCTTTTGCCATTTATAACGACATAAACC
GCCTCATCCCCGGTTAAAGC

Downstream 100 bases:

>100_bases
ACTAGATCCGGAGATAAAATTGAAACACAAGATACTGGGACGAACTTTAATCGCGATAACCTCCATTCTCGTCGCATCTA
TCTACGGAACCGCAGGCGCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 760; Mature: 760

Protein sequence:

>760_residues
MKVRYLVALVSALCASASWAREPFEVKDIRVEGIQRTEAGTVFSYLPVKVGDVLDDEKAAAAIKALYATGFFKDVRLESE
NGVLIVVIEERPAIAQITIVGAKEFEKDKLKEGLKQAGLAESRIFDRSTLEKAEQELKQQYMARGKYAVKITTTTTPLER
NRVGITFHVDEGRTAKIRKINIVGNKAFKEKDLLSAFSLRTPGLLTWLTKEDQYSKQKLGGDLESLRSYYLNRGYLEFSI
ESTQVSITPDMQDIYITVNIVEGPKYDVSEIKLAGELLVPEEELRKLIQLSPGDTFSREKLTESIKLITDRLGDDGYAFA
NVNASPQLDKEKQQVAFTFFIDPGRRVYVRRINITGNSRTRDEVIRREMRQFEGGWYSTSKINRSKTRVDRLNYFTAVNV
ETPAVPGTTDQIDVNVEVKEKPTGAVMFGAGYSNMEGLILSGSVAQDNIFGTGKFVNLMVNTGSVNKTYSLSYTDPYFTK
DGVTAGLDLYKRVLNTRTLSSVMNFNTDTLGAGLRFGIPINENDSIMGGLGAEQTTIDLGPDSPQRNIDFVNKFGRTTIN
IPATLSWRRDGRDSAIWTTSGTTQRVFAEVGLPGGDLTYYKLSYDLRWYFPITEIFTLMLNGELGYGDGYSGKELPFFKN
FFAGGNTSVRGYNISSLGPRDATNRTLGGNKRAVGNIEVLFPMPGMRNDRTVRLSAFLDGGTVWGPGGVRPDQEGLRYSA
GIAVTWISPMGPLKISVAQPLNSQPGDNIQRFQFQFGQQF

Sequences:

>Translated_760_residues
MKVRYLVALVSALCASASWAREPFEVKDIRVEGIQRTEAGTVFSYLPVKVGDVLDDEKAAAAIKALYATGFFKDVRLESE
NGVLIVVIEERPAIAQITIVGAKEFEKDKLKEGLKQAGLAESRIFDRSTLEKAEQELKQQYMARGKYAVKITTTTTPLER
NRVGITFHVDEGRTAKIRKINIVGNKAFKEKDLLSAFSLRTPGLLTWLTKEDQYSKQKLGGDLESLRSYYLNRGYLEFSI
ESTQVSITPDMQDIYITVNIVEGPKYDVSEIKLAGELLVPEEELRKLIQLSPGDTFSREKLTESIKLITDRLGDDGYAFA
NVNASPQLDKEKQQVAFTFFIDPGRRVYVRRINITGNSRTRDEVIRREMRQFEGGWYSTSKINRSKTRVDRLNYFTAVNV
ETPAVPGTTDQIDVNVEVKEKPTGAVMFGAGYSNMEGLILSGSVAQDNIFGTGKFVNLMVNTGSVNKTYSLSYTDPYFTK
DGVTAGLDLYKRVLNTRTLSSVMNFNTDTLGAGLRFGIPINENDSIMGGLGAEQTTIDLGPDSPQRNIDFVNKFGRTTIN
IPATLSWRRDGRDSAIWTTSGTTQRVFAEVGLPGGDLTYYKLSYDLRWYFPITEIFTLMLNGELGYGDGYSGKELPFFKN
FFAGGNTSVRGYNISSLGPRDATNRTLGGNKRAVGNIEVLFPMPGMRNDRTVRLSAFLDGGTVWGPGGVRPDQEGLRYSA
GIAVTWISPMGPLKISVAQPLNSQPGDNIQRFQFQFGQQF
>Mature_760_residues
MKVRYLVALVSALCASASWAREPFEVKDIRVEGIQRTEAGTVFSYLPVKVGDVLDDEKAAAAIKALYATGFFKDVRLESE
NGVLIVVIEERPAIAQITIVGAKEFEKDKLKEGLKQAGLAESRIFDRSTLEKAEQELKQQYMARGKYAVKITTTTTPLER
NRVGITFHVDEGRTAKIRKINIVGNKAFKEKDLLSAFSLRTPGLLTWLTKEDQYSKQKLGGDLESLRSYYLNRGYLEFSI
ESTQVSITPDMQDIYITVNIVEGPKYDVSEIKLAGELLVPEEELRKLIQLSPGDTFSREKLTESIKLITDRLGDDGYAFA
NVNASPQLDKEKQQVAFTFFIDPGRRVYVRRINITGNSRTRDEVIRREMRQFEGGWYSTSKINRSKTRVDRLNYFTAVNV
ETPAVPGTTDQIDVNVEVKEKPTGAVMFGAGYSNMEGLILSGSVAQDNIFGTGKFVNLMVNTGSVNKTYSLSYTDPYFTK
DGVTAGLDLYKRVLNTRTLSSVMNFNTDTLGAGLRFGIPINENDSIMGGLGAEQTTIDLGPDSPQRNIDFVNKFGRTTIN
IPATLSWRRDGRDSAIWTTSGTTQRVFAEVGLPGGDLTYYKLSYDLRWYFPITEIFTLMLNGELGYGDGYSGKELPFFKN
FFAGGNTSVRGYNISSLGPRDATNRTLGGNKRAVGNIEVLFPMPGMRNDRTVRLSAFLDGGTVWGPGGVRPDQEGLRYSA
GIAVTWISPMGPLKISVAQPLNSQPGDNIQRFQFQFGQQF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=807, Percent_Identity=36.0594795539033, Blast_Score=503, Evalue=1e-143,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84521; Mature: 84521

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRYLVALVSALCASASWAREPFEVKDIRVEGIQRTEAGTVFSYLPVKVGDVLDDEKAA
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECEEECCCCCEEEEECEEECCCCCCHHHH
AAIKALYATGFFKDVRLESENGVLIVVIEERPAIAQITIVGAKEFEKDKLKEGLKQAGLA
HHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCH
ESRIFDRSTLEKAEQELKQQYMARGKYAVKITTTTTPLERNRVGITFHVDEGRTAKIRKI
HHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEE
NIVGNKAFKEKDLLSAFSLRTPGLLTWLTKEDQYSKQKLGGDLESLRSYYLNRGYLEFSI
EEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEEEEE
ESTQVSITPDMQDIYITVNIVEGPKYDVSEIKLAGELLVPEEELRKLIQLSPGDTFSREK
ECEEEEECCCCEEEEEEEEEECCCCCCHHHEEEECEEECCHHHHHHHHCCCCCCCCCHHH
LTESIKLITDRLGDDGYAFANVNASPQLDKEKQQVAFTFFIDPGRRVYVRRINITGNSRT
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC
RDEVIRREMRQFEGGWYSTSKINRSKTRVDRLNYFTAVNVETPAVPGTTDQIDVNVEVKE
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCEEEEEEEEEC
KPTGAVMFGAGYSNMEGLILSGSVAQDNIFGTGKFVNLMVNTGSVNKTYSLSYTDPYFTK
CCCCEEEECCCCCCCCCEEEECCCCCCCEEECCEEEEEEEECCCCCEEEEEECCCCCCCC
DGVTAGLDLYKRVLNTRTLSSVMNFNTDTLGAGLRFGIPINENDSIMGGLGAEQTTIDLG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCCCEEEECC
PDSPQRNIDFVNKFGRTTINIPATLSWRRDGRDSAIWTTSGTTQRVFAEVGLPGGDLTYY
CCCCCCCHHHHHHCCCEEEECCEEEEECCCCCCCEEEEECCCCEEHHEECCCCCCCEEEE
KLSYDLRWYFPITEIFTLMLNGELGYGDGYSGKELPFFKNFFAGGNTSVRGYNISSLGPR
EEEEEEEEEECHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCC
DATNRTLGGNKRAVGNIEVLFPMPGMRNDRTVRLSAFLDGGTVWGPGGVRPDQEGLRYSA
CCCCCCCCCCCEEECEEEEEECCCCCCCCCEEEEEEEECCCEEECCCCCCCCHHCCEEEC
GIAVTWISPMGPLKISVAQPLNSQPGDNIQRFQFQFGQQF
CEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKVRYLVALVSALCASASWAREPFEVKDIRVEGIQRTEAGTVFSYLPVKVGDVLDDEKAA
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECEEECCCCCEEEEECEEECCCCCCHHHH
AAIKALYATGFFKDVRLESENGVLIVVIEERPAIAQITIVGAKEFEKDKLKEGLKQAGLA
HHHHHHHHHCCEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCH
ESRIFDRSTLEKAEQELKQQYMARGKYAVKITTTTTPLERNRVGITFHVDEGRTAKIRKI
HHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEE
NIVGNKAFKEKDLLSAFSLRTPGLLTWLTKEDQYSKQKLGGDLESLRSYYLNRGYLEFSI
EEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEEEEE
ESTQVSITPDMQDIYITVNIVEGPKYDVSEIKLAGELLVPEEELRKLIQLSPGDTFSREK
ECEEEEECCCCEEEEEEEEEECCCCCCHHHEEEECEEECCHHHHHHHHCCCCCCCCCHHH
LTESIKLITDRLGDDGYAFANVNASPQLDKEKQQVAFTFFIDPGRRVYVRRINITGNSRT
HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC
RDEVIRREMRQFEGGWYSTSKINRSKTRVDRLNYFTAVNVETPAVPGTTDQIDVNVEVKE
HHHHHHHHHHHHCCCEEECCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCEEEEEEEEEC
KPTGAVMFGAGYSNMEGLILSGSVAQDNIFGTGKFVNLMVNTGSVNKTYSLSYTDPYFTK
CCCCEEEECCCCCCCCCEEEECCCCCCCEEECCEEEEEEEECCCCCEEEEEECCCCCCCC
DGVTAGLDLYKRVLNTRTLSSVMNFNTDTLGAGLRFGIPINENDSIMGGLGAEQTTIDLG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEECCCCCCEEEECC
PDSPQRNIDFVNKFGRTTINIPATLSWRRDGRDSAIWTTSGTTQRVFAEVGLPGGDLTYY
CCCCCCCHHHHHHCCCEEEECCEEEEECCCCCCCEEEEECCCCEEHHEECCCCCCCEEEE
KLSYDLRWYFPITEIFTLMLNGELGYGDGYSGKELPFFKNFFAGGNTSVRGYNISSLGPR
EEEEEEEEEECHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCC
DATNRTLGGNKRAVGNIEVLFPMPGMRNDRTVRLSAFLDGGTVWGPGGVRPDQEGLRYSA
CCCCCCCCCCCEEECEEEEEECCCCCCCCCEEEEEEEECCCEEECCCCCCCCHHCCEEEC
GIAVTWISPMGPLKISVAQPLNSQPGDNIQRFQFQFGQQF
CEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]