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The map label for this gene is tsf

Identifier: 82701791

GI number: 82701791

Start: 753754

End: 754662

Strand: Direct

Name: tsf

Synonym: Nmul_A0658

Alternate gene names: 82701791

Gene position: 753754-754662 (Clockwise)

Preceding gene: 162139865

Following gene: 82701792

Centisome position: 23.67

GC content: 55.67

Gene sequence:

>909_bases
ATGGCGGAAATCACCGCACAAATGGTGAAGGAATTGCGCGAGATAACGGGTCTCGGCATGATGGAGTGTAAGAAGGCCTT
AACTGAAGCCAGCGGAGACATGAAAGCCGCGGAAGACCTTCTGCGGATCAAGAGTGGCGCCAAAGCGAGCAAGGCAGCCG
GACGGACTGCAGCGGAAGGGATAGTGGCGGCCCATATCGCGCGTGACGGCAAGAGCGGCGCGCTGGTGGAAGTCAACTGC
GAAACCGATTTTGTCGCAAGGAACGAAGACTTCATCGGCTTTGCGCATAGCCTTGCAGAATTGCTGACAACGGAAAGCAT
AGGGGACAACGAAGCGCTCGCAAATGCCAGGCTGTCAAACGGCGAAAGCGTGGAGGAGTTCCGGAAAGCGTTGGTAATGA
AGCTGGGTGAAAATATCAGCATACGCCGTTTTGCGCGCCATCAGGTAGCCGGTGCGCAGGATCGTCTGGCCTCCTATCTG
CACGGTGCAAAAATAGGCGTCATGGTCGATTATACGGGTGGCGATCCGGCCTTGGGCAAGGACCTCGCAATGCATATCGC
CGCCAGCAAGCCGGTGTGCGTATCAAGCGAGCAGGTTTCTCCGGAGCTGCTGGAGCGTGAACGCCAGATATATACCGCCC
AGGCAGCGGAGAGCGGAAAGCCAGCCGATATCGTTGCGCGCATGGTCGATGGGCGTATTGCCAAATATCTCGCCGAGATA
ACGCTTCTGGGGCAACCGTTTGTCAAAAATCCGGATCAGACGGTGAAACAGCTGCTCGCGGAAAAATCTGCTCAGGTCAA
CGGTTTTACCTTGTATATCGTTGGGGAAGGGATAGAAAAGAAATCTGGCGACTTTGCTGCCGAAGTCATGGCGCAGGTGG
GTCAGGCCAAACAGGAAAAAGCGTCTTAG

Upstream 100 bases:

>100_bases
GTGGCCGGCGAACAGGGATAAATTTCGTCGGAGTGGGCACGTGAATCTGTGCCGGGGCGCATATCCAGCGCTTCTTTTTT
GAAAATTATCTGGAGCGAAT

Downstream 100 bases:

>100_bases
CCGCCGGATTGCTCATGACCATACCCGCTTATAAACGCATCCTGCTGAAGCTCTCGGGCGAAGCTCTCATGGGTGACGAT
AGTTATGGCATCAACCGGGA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MAEITAQMVKELREITGLGMMECKKALTEASGDMKAAEDLLRIKSGAKASKAAGRTAAEGIVAAHIARDGKSGALVEVNC
ETDFVARNEDFIGFAHSLAELLTTESIGDNEALANARLSNGESVEEFRKALVMKLGENISIRRFARHQVAGAQDRLASYL
HGAKIGVMVDYTGGDPALGKDLAMHIAASKPVCVSSEQVSPELLERERQIYTAQAAESGKPADIVARMVDGRIAKYLAEI
TLLGQPFVKNPDQTVKQLLAEKSAQVNGFTLYIVGEGIEKKSGDFAAEVMAQVGQAKQEKAS

Sequences:

>Translated_302_residues
MAEITAQMVKELREITGLGMMECKKALTEASGDMKAAEDLLRIKSGAKASKAAGRTAAEGIVAAHIARDGKSGALVEVNC
ETDFVARNEDFIGFAHSLAELLTTESIGDNEALANARLSNGESVEEFRKALVMKLGENISIRRFARHQVAGAQDRLASYL
HGAKIGVMVDYTGGDPALGKDLAMHIAASKPVCVSSEQVSPELLERERQIYTAQAAESGKPADIVARMVDGRIAKYLAEI
TLLGQPFVKNPDQTVKQLLAEKSAQVNGFTLYIVGEGIEKKSGDFAAEVMAQVGQAKQEKAS
>Mature_301_residues
AEITAQMVKELREITGLGMMECKKALTEASGDMKAAEDLLRIKSGAKASKAAGRTAAEGIVAAHIARDGKSGALVEVNCE
TDFVARNEDFIGFAHSLAELLTTESIGDNEALANARLSNGESVEEFRKALVMKLGENISIRRFARHQVAGAQDRLASYLH
GAKIGVMVDYTGGDPALGKDLAMHIAASKPVCVSSEQVSPELLERERQIYTAQAAESGKPADIVARMVDGRIAKYLAEIT
LLGQPFVKNPDQTVKQLLAEKSAQVNGFTLYIVGEGIEKKSGDFAAEVMAQVGQAKQEKAS

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=287, Percent_Identity=27.8745644599303, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084500, Length=308, Percent_Identity=26.6233766233766, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI291084498, Length=91, Percent_Identity=40.6593406593407, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI291084502, Length=91, Percent_Identity=40.6593406593407, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786366, Length=297, Percent_Identity=50.8417508417508, Blast_Score=258, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI17561440, Length=314, Percent_Identity=28.343949044586, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI19921466, Length=285, Percent_Identity=30.5263157894737, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_NITMU (Q2YBA6)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411357.1
- ProteinModelPortal:   Q2YBA6
- SMR:   Q2YBA6
- STRING:   Q2YBA6
- GeneID:   3785143
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A0658
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- PhylomeDB:   Q2YBA6
- ProtClustDB:   PRK09377
- BioCyc:   NMUL323848:NMUL_A0658-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32237; Mature: 32106

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEITAQMVKELREITGLGMMECKKALTEASGDMKAAEDLLRIKSGAKASKAAGRTAAEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHH
IVAAHIARDGKSGALVEVNCETDFVARNEDFIGFAHSLAELLTTESIGDNEALANARLSN
HHHHHHHCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
GESVEEFRKALVMKLGENISIRRFARHQVAGAQDRLASYLHGAKIGVMVDYTGGDPALGK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCH
DLAMHIAASKPVCVSSEQVSPELLERERQIYTAQAAESGKPADIVARMVDGRIAKYLAEI
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TLLGQPFVKNPDQTVKQLLAEKSAQVNGFTLYIVGEGIEKKSGDFAAEVMAQVGQAKQEK
HHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC
AS
CC
>Mature Secondary Structure 
AEITAQMVKELREITGLGMMECKKALTEASGDMKAAEDLLRIKSGAKASKAAGRTAAEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHH
IVAAHIARDGKSGALVEVNCETDFVARNEDFIGFAHSLAELLTTESIGDNEALANARLSN
HHHHHHHCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
GESVEEFRKALVMKLGENISIRRFARHQVAGAQDRLASYLHGAKIGVMVDYTGGDPALGK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEECCCCCCCCH
DLAMHIAASKPVCVSSEQVSPELLERERQIYTAQAAESGKPADIVARMVDGRIAKYLAEI
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
TLLGQPFVKNPDQTVKQLLAEKSAQVNGFTLYIVGEGIEKKSGDFAAEVMAQVGQAKQEK
HHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA