| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is pyrH
Identifier: 82701792
GI number: 82701792
Start: 754677
End: 755393
Strand: Direct
Name: pyrH
Synonym: Nmul_A0659
Alternate gene names: 82701792
Gene position: 754677-755393 (Clockwise)
Preceding gene: 82701791
Following gene: 82701793
Centisome position: 23.7
GC content: 56.07
Gene sequence:
>717_bases ATGACCATACCCGCTTATAAACGCATCCTGCTGAAGCTCTCGGGCGAAGCTCTCATGGGTGACGATAGTTATGGCATCAA CCGGGATGTAATCGAACGAATCGTGGCCGAGATAGCCGAAGTGAATCAGCTGGGTGTCGAGGTTGCGGTAGTGATAGGAG GGGGCAACATTTTCCGGGGAATGACCTCCTCCGCGGAAGGCATGGACCGGGCCACCGCGGACTATATGGGGATGCTGGCC ACCGTCATGAATGCGCTGGCGTTACAGGATGCGATGCGGCGTGCCGGTCTGGTGAGCAGGGTGCAATCCGCCCTCCGCAT CGATCAGGTGGTGGAACCGTATATTCGGGGCAAGGCCATACGCTATCTGGAGGAGGGCAAAATAGTCATTTTTGCCGCCG GCACGGGTAATCCATTTTTTACGACCGATACAGCGGCGGCTCTGCGGGGAATGGAGATGAACGTGGATATCGTGCTCAAG GCCACCAAGGTCGATGGGGTATATACCACCGATCCCAAAATAAATCCGGATGCAGAACGCTACCAGAGACTGTCGTTTGA TACTGCCATTGCCGAGAATCTCAAGGTGATGGATGCCACCGCGCTGACTTTGTGCCGCGACCAGAAGCTTCCGCTCAAAG TCTTCAGTATCTTCAAGGCGGAGGCGTTGAGACGGGTAGTCATGGGCGAGGAAGAGGGCACGTTGGTGGAGGTCTGA
Upstream 100 bases:
>100_bases GGGAAGGGATAGAAAAGAAATCTGGCGACTTTGCTGCCGAAGTCATGGCGCAGGTGGGTCAGGCCAAACAGGAAAAAGCG TCTTAGCCGCCGGATTGCTC
Downstream 100 bases:
>100_bases GGGCTTTCTGGCTACCTTGGCCATATGGCCGCATTATAGTAGGGGCCATAGCTTGGAATTGCCGTCATCGTGCCGCGGCA TGGACGCCAAACAGTGACGT
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTIPAYKRILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRGMTSSAEGMDRATADYMGMLA TVMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAIRYLEEGKIVIFAAGTGNPFFTTDTAAALRGMEMNVDIVLK ATKVDGVYTTDPKINPDAERYQRLSFDTAIAENLKVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLVEV
Sequences:
>Translated_238_residues MTIPAYKRILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRGMTSSAEGMDRATADYMGMLA TVMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAIRYLEEGKIVIFAAGTGNPFFTTDTAAALRGMEMNVDIVLK ATKVDGVYTTDPKINPDAERYQRLSFDTAIAENLKVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLVEV >Mature_237_residues TIPAYKRILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRGMTSSAEGMDRATADYMGMLAT VMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAIRYLEEGKIVIFAAGTGNPFFTTDTAAALRGMEMNVDIVLKA TKVDGVYTTDPKINPDAERYQRLSFDTAIAENLKVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLVEV
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family
Homologues:
Organism=Escherichia coli, GI1786367, Length=233, Percent_Identity=54.5064377682403, Blast_Score=267, Evalue=5e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRH_NITMU (Q2YBA5)
Other databases:
- EMBL: CP000103 - RefSeq: YP_411358.1 - HSSP: P65938 - ProteinModelPortal: Q2YBA5 - SMR: Q2YBA5 - STRING: Q2YBA5 - GeneID: 3785144 - GenomeReviews: CP000103_GR - KEGG: nmu:Nmul_A0659 - eggNOG: COG0528 - HOGENOM: HBG497552 - OMA: RHMEKGR - PhylomeDB: Q2YBA5 - ProtClustDB: PRK00358 - BioCyc: NMUL323848:NMUL_A0659-MONOMER - GO: GO:0005737 - HAMAP: MF_01220_B - InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF005650 - TIGRFAMs: TIGR02075
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.4.22
Molecular weight: Translated: 25987; Mature: 25855
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: BINDING 54-54 BINDING 55-55 BINDING 59-59 BINDING 74-74 BINDING 162-162 BINDING 168-168 BINDING 171-171
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPAYKRILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRG CCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHCC MTSSAEGMDRATADYMGMLATVMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RYLEEGKIVIFAAGTGNPFFTTDTAAALRGMEMNVDIVLKATKVDGVYTTDPKINPDAER EEEECCCEEEEEECCCCCCEECCHHHHHCCCCCCEEEEEEEEEECCEEECCCCCCCCHHH YQRLSFDTAIAENLKVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLVEV HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEC >Mature Secondary Structure TIPAYKRILLKLSGEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRG CCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHCC MTSSAEGMDRATADYMGMLATVMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH RYLEEGKIVIFAAGTGNPFFTTDTAAALRGMEMNVDIVLKATKVDGVYTTDPKINPDAER EEEECCCEEEEEECCCCCCEECCHHHHHCCCCCCEEEEEEEEEECCEEECCCCCCCCHHH YQRLSFDTAIAENLKVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLVEV HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA