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The map label for this gene is omlA [H]

Identifier: 82701610

GI number: 82701610

Start: 531923

End: 532624

Strand: Direct

Name: omlA [H]

Synonym: Nmul_A0476

Alternate gene names: 82701610

Gene position: 531923-532624 (Clockwise)

Preceding gene: 82701605

Following gene: 82701611

Centisome position: 16.7

GC content: 56.55

Gene sequence:

>702_bases
ATGCGCGCAAGAATTATCACGTTGGCTGTTTTGCTGCTCGCGGGGTGTTCATCGGTTCCTTCCTTGCTCTACAAGATAGA
GATTCAGCAGGGTAATGTCATTACCCAGGAAATGGTGAACAAGCTGAAGCCGGGCATGACTCGTTCGCAAGTACGCTTTG
CGTTGGGCTCGCCCATGATCAGCGATGCGTTTCATGAAAATCGCTGGGACTATCTGTATCGGTTTGAGCAGAGGGGAAAG
CTGATCGAGCAGAGAAAGCTCACGATCTTTTTTGAAGACGATCATCTGGTGCGTATCGACGGTTCGTTCACTGCTCCCGT
TGCCTTTCTTCAGTCTCAGCCTCAGGTGTCGGAGGCAGGTGCTGCGCCTGAATCAACCGTGTCGTCCGAGGCAGTCATGG
AAAAGGGCGTCACTCCGGTCCCGGTGCAAGTTCCCGCCGGGGTGCCGTTTTCCGGGCCTCTTTCAGCACCTCCTTCGGCG
CCCCTGTCGGCCGGCACTGAAACAATGGATACTGTGCCCATATTGCCCGCATTGCCCGCCTCACCCCCTCCTTCCCCGGA
GGCGTCTCTCTCAGCCGGTTCGGGCGAAGTTTCTTCGAGTGCTGTTCCAGAGTCACCTTTGCCCGAGAAACCAGCGCCTA
GGCAAGTGCCCTCCCAGGCGACGGATACCGGAATCATGGATGCGGATCAGCCAAAGGAATAG

Upstream 100 bases:

>100_bases
GGTCTTAAGATTGCTCGGATTACTCATAGTGCATCCAATCGTCAAGTTATTTGCTGTATCATATAACGTTAAGTTTGCTT
TGGAAACCTACGTCGCCGCG

Downstream 100 bases:

>100_bases
GACAATTTTGCAAGTCAGTTTATCAGACTATCAGACAAGGAATGTCGACATTGAATATTGCTGTGGCTGGAAGTTCCGGG
CGCATGGGACGCGCCTTACT

Product: SmpA/OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRARIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMISDAFHENRWDYLYRFEQRGK
LIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQPQVSEAGAAPESTVSSEAVMEKGVTPVPVQVPAGVPFSGPLSAPPSA
PLSAGTETMDTVPILPALPASPPPSPEASLSAGSGEVSSSAVPESPLPEKPAPRQVPSQATDTGIMDADQPKE

Sequences:

>Translated_233_residues
MRARIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMISDAFHENRWDYLYRFEQRGK
LIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQPQVSEAGAAPESTVSSEAVMEKGVTPVPVQVPAGVPFSGPLSAPPSA
PLSAGTETMDTVPILPALPASPPPSPEASLSAGSGEVSSSAVPESPLPEKPAPRQVPSQATDTGIMDADQPKE
>Mature_233_residues
MRARIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMISDAFHENRWDYLYRFEQRGK
LIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQPQVSEAGAAPESTVSSEAVMEKGVTPVPVQVPAGVPFSGPLSAPPSA
PLSAGTETMDTVPILPALPASPPPSPEASLSAGSGEVSSSAVPESPLPEKPAPRQVPSQATDTGIMDADQPKE

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=105, Percent_Identity=38.0952380952381, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 24772; Mature: 24772

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMI
CCHHHHHHHHHHHHCCCHHHHEEEEEEECCCCEEHHHHHHHHCCCCCHHHHHHHHCCCHH
SDAFHENRWDYLYRFEQRGKLIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQPQVSEAG
HHHHHCCCHHHHHHHHHHCCHHHCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCHHHHC
AAPESTVSSEAVMEKGVTPVPVQVPAGVPFSGPLSAPPSAPLSAGTETMDTVPILPALPA
CCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPPPSPEASLSAGSGEVSSSAVPESPLPEKPAPRQVPSQATDTGIMDADQPKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRARIITLAVLLLAGCSSVPSLLYKIEIQQGNVITQEMVNKLKPGMTRSQVRFALGSPMI
CCHHHHHHHHHHHHCCCHHHHEEEEEEECCCCEEHHHHHHHHCCCCCHHHHHHHHCCCHH
SDAFHENRWDYLYRFEQRGKLIEQRKLTIFFEDDHLVRIDGSFTAPVAFLQSQPQVSEAG
HHHHHCCCHHHHHHHHHHCCHHHCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCHHHHC
AAPESTVSSEAVMEKGVTPVPVQVPAGVPFSGPLSAPPSAPLSAGTETMDTVPILPALPA
CCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPPPSPEASLSAGSGEVSSSAVPESPLPEKPAPRQVPSQATDTGIMDADQPKE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334; 10984043 [H]