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The map label for this gene is ctaC [H]

Identifier: 82701594

GI number: 82701594

Start: 510815

End: 511876

Strand: Reverse

Name: ctaC [H]

Synonym: Nmul_A0460

Alternate gene names: 82701594

Gene position: 511876-510815 (Counterclockwise)

Preceding gene: 82701595

Following gene: 82701593

Centisome position: 16.08

GC content: 54.8

Gene sequence:

>1062_bases
ATGAAAGCTTCCAAGTCAGGTTTCGATTCCAGGCCGGCAATAAAAAACCTACGTTTCCGGATAACGCTTCTGGCGCCATC
CATGGTCGCTGCAAGACCATCCGAAGCAGCAGACACGCTCAGCACCCCTTTAAACTATTTCCTGCACAGCTACGGCCCTG
CCGCCACGCCCGTAATGCATCTGGGGTGGCTGATGACGGCTTTGCTCTCCGCCATTACCCTTATCGTCATACTGCTACTG
GTAATCGCCATAGTTCGCAAGCGCAGCTCTGCCGACTCCGGCATGATCGGGGCCGAGAGCGGAGGACTCAAATGGGTTTA
TATCGGTACAGGGATTTCCACCTTCATATTGGCGGGGCTCACCGTTCATTTCCTGACCGTGCTCAATGCGGTTGCCAAGC
CCACCGAAACTCCAGTCCTCACCCTGACCGTAACGGGTTACGACTGGTGGTGGAACATTGAATACGAGCATGGCGATCCG
GCGAAACGTTTTGTGACCGCCAATGAAATTCATATACCTGTAGGCAGACCGGTGCTGCTCAAGTTGAAAAGCGCGGACGT
CATTCATGCGTTCTGGGTACCTGTACTCGCCGGAAAAACTCAAATGATTCCGGGCCTGGTCAATCAGAAGTGGATTCAGG
CAGACGTCCCCGGCATTTATGCCGGTCAATGCGCACAATTTTGTGGAGCGGCCCACGCCCATATGAATCTGGAAGTGATT
GCAGAAAGCGATCGGGATTTCGAGAAATGGCAAGAGGCCCAGCGCCGCACGGCTTTCCCAGTGTCAGAACACAATGAGCA
TGGATACAAGCTGTTCATGGATCGCTGCGGGGGATGCCACGCGGTGCGTGGAACGGAAGCGGAAGGCCTGCACGGTCCTG
ATCTCACGCATCTGAACTCGCGCGGTCGCATTGCTGCCGGACTGTTGACCAATACACCGGATCACCTGATGGAGTGGATT
ACCCGCGCACAATACTTCAAGCCGGGAGCACGCATGCCAAGTATTGCATTATCGGACAGTGAAGCTTCAGCACTGGCCTC
CTATCTTTCGACACTGGACTAG

Upstream 100 bases:

>100_bases
CTCGATATTCTCTTGCAGTCCGTTCGGCCTTTGGTCACTCCGTCGCAGTCGGAATCGCGCTTATCGCTGCATCTCTGCGT
ACACTGGAGTTGGTTAAGCC

Downstream 100 bases:

>100_bases
AACTAGAGTATGGCTGCTATCGACGCCACCCGGCATCGCATCGACCCCCCTCTCGAACGGATCCCGGAAGTGGGACGTAT
TCCCGCGGGGTCCCCAATCG

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKASKSGFDSRPAIKNLRFRITLLAPSMVAARPSEAADTLSTPLNYFLHSYGPAATPVMHLGWLMTALLSAITLIVILLL
VIAIVRKRSSADSGMIGAESGGLKWVYIGTGISTFILAGLTVHFLTVLNAVAKPTETPVLTLTVTGYDWWWNIEYEHGDP
AKRFVTANEIHIPVGRPVLLKLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVI
AESDRDFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNSRGRIAAGLLTNTPDHLMEWI
TRAQYFKPGARMPSIALSDSEASALASYLSTLD

Sequences:

>Translated_353_residues
MKASKSGFDSRPAIKNLRFRITLLAPSMVAARPSEAADTLSTPLNYFLHSYGPAATPVMHLGWLMTALLSAITLIVILLL
VIAIVRKRSSADSGMIGAESGGLKWVYIGTGISTFILAGLTVHFLTVLNAVAKPTETPVLTLTVTGYDWWWNIEYEHGDP
AKRFVTANEIHIPVGRPVLLKLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVI
AESDRDFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNSRGRIAAGLLTNTPDHLMEWI
TRAQYFKPGARMPSIALSDSEASALASYLSTLD
>Mature_353_residues
MKASKSGFDSRPAIKNLRFRITLLAPSMVAARPSEAADTLSTPLNYFLHSYGPAATPVMHLGWLMTALLSAITLIVILLL
VIAIVRKRSSADSGMIGAESGGLKWVYIGTGISTFILAGLTVHFLTVLNAVAKPTETPVLTLTVTGYDWWWNIEYEHGDP
AKRFVTANEIHIPVGRPVLLKLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVI
AESDRDFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNSRGRIAAGLLTNTPDHLMEWI
TRAQYFKPGARMPSIALSDSEASALASYLSTLD

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=116, Percent_Identity=34.4827586206897, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1786635, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6226540, Length=140, Percent_Identity=27.8571428571429, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 38566; Mature: 38566

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASKSGFDSRPAIKNLRFRITLLAPSMVAARPSEAADTLSTPLNYFLHSYGPAATPVMH
CCCCCCCCCCCCHHHCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
LGWLMTALLSAITLIVILLLVIAIVRKRSSADSGMIGAESGGLKWVYIGTGISTFILAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHH
TVHFLTVLNAVAKPTETPVLTLTVTGYDWWWNIEYEHGDPAKRFVTANEIHIPVGRPVLL
HHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCCCHHHHEEECCEEEECCCCCEEE
KLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVI
EECCCCCHHHHHHHHHCCCHHHCCCHHCCCCEECCCCCCHHHHHHHHHCHHHHCCEEEEE
AESDRDFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNS
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCEEECCCCCCCCCCCCCCEECC
RGRIAAGLLTNTPDHLMEWITRAQYFKPGARMPSIALSDSEASALASYLSTLD
CCCEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKASKSGFDSRPAIKNLRFRITLLAPSMVAARPSEAADTLSTPLNYFLHSYGPAATPVMH
CCCCCCCCCCCCHHHCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
LGWLMTALLSAITLIVILLLVIAIVRKRSSADSGMIGAESGGLKWVYIGTGISTFILAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHH
TVHFLTVLNAVAKPTETPVLTLTVTGYDWWWNIEYEHGDPAKRFVTANEIHIPVGRPVLL
HHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCCCHHHHEEECCEEEECCCCCEEE
KLKSADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEVI
EECCCCCHHHHHHHHHCCCHHHCCCHHCCCCEECCCCCCHHHHHHHHHCHHHHCCEEEEE
AESDRDFEKWQEAQRRTAFPVSEHNEHGYKLFMDRCGGCHAVRGTEAEGLHGPDLTHLNS
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCEEECCCCCCCCCCCCCCEECC
RGRIAAGLLTNTPDHLMEWITRAQYFKPGARMPSIALSDSEASALASYLSTLD
CCCEEEHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]