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The map label for this gene is 82701326

Identifier: 82701326

GI number: 82701326

Start: 201876

End: 202493

Strand: Direct

Name: 82701326

Synonym: Nmul_A0192

Alternate gene names: NA

Gene position: 201876-202493 (Clockwise)

Preceding gene: 82701325

Following gene: 82701330

Centisome position: 6.34

GC content: 54.05

Gene sequence:

>618_bases
GTGAGGCATCGACCGCACTATTACAGACTTGTAGTATGGATAGCAGCGGCGCTACTGACGGCCCCGCTCCTTTCGGCCTG
TAGCAAGACAGAAAAGCCGGCGTTTCTTTCGACGGACATTACCGGCGCCGATTTCGGCAAAGATTTCAACCTCACCGATC
ATAACGGTAAGATGCGAACCCTTGCCGACTTCAAGGGGCAGGTCGTCACGGTATTTTTCGGCTACACTCACTGTCCTGAT
GCCTGTCCTGCGACCATGGGAAATCTTGCGGCGGCGATGGATATGTTGGGCGCCGATGCGTCCCGTGTGCAAGTGCTGTT
TATTACCGTCGATCCCGAGCGCGACCGGCCTGAAGTCCTGAAAGCATATCTGTCCGCCTTCAATCCTAGCTTCCTCGGAC
TGTATGGCGACGAACGCGCGATAAAGAAGACCACGAAAGAATTTAACGTCGTCTACCAGAAACAACAAGGCGGTGCCCAC
CAGCATGATAGCGTGGACCACTCCACCGGAACCTACATCTACGATACAAAGGGGAAGTTGCGGCTATACGTCAGTAATGA
TAAAGGCGCAGACGTCTTCGCCCACGACATCTCCCAGCTCTTGAAAACTTCGGGTTAG

Upstream 100 bases:

>100_bases
CCAGCTGGCCCGCAGCGCGTTTCGCTACTCGATCCTTTATCTGGCAGGATTGTTCGCGGTGCTCCTGGTAGACCATTACA
TACGTTTCTAAGGGACATGC

Downstream 100 bases:

>100_bases
CAAAGGCATTTTGCTAATCTTGAATTGAACAGTTGAACAGATGCGGAAAATTCCCGTTGCCGATTCGCAAGCTGGATACG
CGTGTCTATGGAAACAGCTT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRHRPHYYRLVVWIAAALLTAPLLSACSKTEKPAFLSTDITGADFGKDFNLTDHNGKMRTLADFKGQVVTVFFGYTHCPD
ACPATMGNLAAAMDMLGADASRVQVLFITVDPERDRPEVLKAYLSAFNPSFLGLYGDERAIKKTTKEFNVVYQKQQGGAH
QHDSVDHSTGTYIYDTKGKLRLYVSNDKGADVFAHDISQLLKTSG

Sequences:

>Translated_205_residues
MRHRPHYYRLVVWIAAALLTAPLLSACSKTEKPAFLSTDITGADFGKDFNLTDHNGKMRTLADFKGQVVTVFFGYTHCPD
ACPATMGNLAAAMDMLGADASRVQVLFITVDPERDRPEVLKAYLSAFNPSFLGLYGDERAIKKTTKEFNVVYQKQQGGAH
QHDSVDHSTGTYIYDTKGKLRLYVSNDKGADVFAHDISQLLKTSG
>Mature_205_residues
MRHRPHYYRLVVWIAAALLTAPLLSACSKTEKPAFLSTDITGADFGKDFNLTDHNGKMRTLADFKGQVVTVFFGYTHCPD
ACPATMGNLAAAMDMLGADASRVQVLFITVDPERDRPEVLKAYLSAFNPSFLGLYGDERAIKKTTKEFNVVYQKQQGGAH
QHDSVDHSTGTYIYDTKGKLRLYVSNDKGADVFAHDISQLLKTSG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=154, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI281182722, Length=154, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI281182716, Length=154, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI153791313, Length=154, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI4759068, Length=160, Percent_Identity=28.75, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17531419, Length=160, Percent_Identity=30, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6319498, Length=188, Percent_Identity=34.5744680851064, Blast_Score=108, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6319511, Length=154, Percent_Identity=34.4155844155844, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19920710, Length=154, Percent_Identity=35.7142857142857, Blast_Score=104, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22656; Mature: 22656

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRPHYYRLVVWIAAALLTAPLLSACSKTEKPAFLSTDITGADFGKDFNLTDHNGKMRT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
LADFKGQVVTVFFGYTHCPDACPATMGNLAAAMDMLGADASRVQVLFITVDPERDRPEVL
HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
KAYLSAFNPSFLGLYGDERAIKKTTKEFNVVYQKQQGGAHQHDSVDHSTGTYIYDTKGKL
HHHHHHCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEECCCEE
RLYVSNDKGADVFAHDISQLLKTSG
EEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHRPHYYRLVVWIAAALLTAPLLSACSKTEKPAFLSTDITGADFGKDFNLTDHNGKMRT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEE
LADFKGQVVTVFFGYTHCPDACPATMGNLAAAMDMLGADASRVQVLFITVDPERDRPEVL
HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
KAYLSAFNPSFLGLYGDERAIKKTTKEFNVVYQKQQGGAHQHDSVDHSTGTYIYDTKGKL
HHHHHHCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCEEEECCCEE
RLYVSNDKGADVFAHDISQLLKTSG
EEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA