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The map label for this gene is yjiP [H]

Identifier: 82546685

GI number: 82546685

Start: 4442927

End: 4443931

Strand: Direct

Name: yjiP [H]

Synonym: SBO_4390

Alternate gene names: 82546685

Gene position: 4442927-4443931 (Clockwise)

Preceding gene: 161984785

Following gene: 82546686

Centisome position: 98.3

GC content: 49.35

Gene sequence:

>1005_bases
ATGACAAACTTCACGACCAGCACGCCACATGACGCATTATTTAAATCCTTTCTCACTCACCCTGACACCGCGCGGGATTT
TATGGAGATCCACTTACCCAAAGATTTACGTGAACTGTGCGATCTCGACAGCTTAAAACTGGAATCCGCCAGCTTTGTCG
ATGAAAAATTGCGGGCGCTACACTCCGATATTCTGTGGTCGGTAAAGACCCGTGAAGGTGATGGTTATATTTACGTAGTG
ATTGAACATCAGAGCCGCGAGGATATTCATATGGCATTTCGCCTGATGCGATATTCCATGGCGGTGATGCAGCGCCATAT
CGAGCATGATAAACGCCGGCCGCTACCGCTGGTTATCCCGATGCTGTTTTATCACGGTAGCCGTAGTCCTTACCCCTGGT
CCCTGTGCTGGCTGGACGAATTTGCCGCCCCGACTACCGCACGGAAACTTTATAGCGCAGCGTTCCCGCTGGTGGATGTC
ACTGTCGTGCCAGACGACGAGATTGTGCAGCATCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCG
CGATTTGATGGGGCTTATTGACCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGT
TAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAAGGCGTTTATCAGCGAACTTACCAGGCGAATGCCACACCAC
AGGGAGCGAATAATGACAATTGCAGAGCGAATTCATAATGATGGATGGCTGTTGGGAAGGGAGAGGGGGAGGAAAGAAGG
GAAAGTAGAAGGGGAACGGAGCCTCCTCCGATTGTTGTTGCAGAATGGGGCCGATCCTGAATGGATACAACGATATACCG
GACTTTCGGCAGAGCAAATGCAGGCATTAGATCTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTC
ACCTCAGAACAACACAGGTGCTCCAATGAAAAAAAGAAATTTTAG

Upstream 100 bases:

>100_bases
GACGCCTGGAAAGCACCTCGGGGAACGAGAAATTGCCGGGTGAGAATGGTTTTGTTAGTCGCTAAAGTCGGGCCATCTTA
TCTACAGGTGACGGATCGCC

Downstream 100 bases:

>100_bases
CGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACTGAACCGCCCCGGGAATCCTGGAGACTAAAC
TCCCTGAGAAAGAGGTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVV
IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFKAFISELTRRMPHH
RERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQMQALDLKWHTEFGHLNRGDML
TSEQHRCSNEKKKF

Sequences:

>Translated_334_residues
MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVV
IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFKAFISELTRRMPHH
RERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQMQALDLKWHTEFGHLNRGDML
TSEQHRCSNEKKKF
>Mature_333_residues
TNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVI
EHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDVT
VVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFKAFISELTRRMPHHR
ERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQMQALDLKWHTEFGHLNRGDMLT
SEQHRCSNEKKKF

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=302, Percent_Identity=61.9205298013245, Blast_Score=380, Evalue=1e-107,
Organism=Escherichia coli, GI1789816, Length=302, Percent_Identity=55.2980132450331, Blast_Score=348, Evalue=3e-97,
Organism=Escherichia coli, GI1788577, Length=282, Percent_Identity=57.4468085106383, Blast_Score=337, Evalue=4e-94,
Organism=Escherichia coli, GI1786324, Length=271, Percent_Identity=51.6605166051661, Blast_Score=286, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 39052; Mature: 38920

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
HSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIP
HHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
MLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDVTVVPDDEIVQHRRVALLELI
HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH
QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFKAFISELTRRMPHH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
RERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQM
HHHHHHHHHHHCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
QALDLKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
HHHHCEEECCCCCCCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
TNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
HSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIP
HHHHHEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
MLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDVTVVPDDEIVQHRRVALLELI
HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH
QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFKAFISELTRRMPHH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH
RERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLLRLLLQNGADPEWIQRYTGLSAEQM
HHHHHHHHHHHCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
QALDLKWHTEFGHLNRGDMLTSEQHRCSNEKKKF
HHHHCEEECCCCCCCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]