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The map label for this gene is yjiK [H]

Identifier: 82546680

GI number: 82546680

Start: 4436682

End: 4437653

Strand: Reverse

Name: yjiK [H]

Synonym: SBO_4384

Alternate gene names: 82546680

Gene position: 4437653-4436682 (Counterclockwise)

Preceding gene: 82546681

Following gene: 82546679

Centisome position: 98.18

GC content: 42.39

Gene sequence:

>972_bases
ATGGTGTCTGGCGCTGCATTGCACATTACCGGGTTTCTCCGCGTTAAGGATTCATTAAGGTCGCTACGTATACTTCTCGA
TATCTTATTGATTTGCCTTAAAGGGATTACCGTGACAAAAAGTATTTCGTTAAGTAAACGCATCTCCGTTATTGTGATTC
TTTTTGCCATTGTGGCAGTGTGTACTTTCTTCGTGCAATCTTGCGCCCGTAAAAGCAATCATGCAGCATCATTTCAGAAT
TACCACGCCACCATTGACGGCAAAGAAATTGCAGGCATAACGAATAATATCTCTTCGCTGACCTGGTCGGCACAAAGCAA
TACTCTTTTTAGCACTATCAACAAACCTGCCGCCATTGTTGAAATGACCACCAATGGTGATTTTATCCGCACAATTCCTC
TGGATTTTGTTAAGGATCTCGAGACGATCGAATACATTGGCGATAATCAGTTTGTCATTAGCGATGAGCGCGATTACGCC
ATTTATGTGATTTCACTGACCCCAAACTCGGAAGTAAAAATCCTCAAAAAAATAAAAATCCCGCTGCAAGACTCCCCAAC
CAATTGCGGTTTTGAAGGGTTAGCTTATTCTCGCCAGGATCACACTTTCTGGTTTTTTAAAGAGAAAAATCCGATTGAGG
TCTACAAAGTTAACGGGCTGTTAAGTAGCAATGAATTACACATCAGCAAAGACGAGGCACTACAACGGCAATTTACTTTA
GATGATGTGTCCGGCGCAGAATTTAACCAGCAAAAAAATACGCTTCTGGTGCTGTCTCATGAATCTCGCGCACTCCAGGA
AGTAACCCTGGTTGGCGAGGTTATCGGTGAAATATCACTAACCAAAGGTAGTCGAGGTTTGTCGCATAACATCAAACAGG
CCGAAGGGATTGCGATGGATGCCTCTGGTAATATTTATATCGTTAGCGAACCAAATCGTTTTTATCGCTTTACCCCTAAA
TCATCGCATTAA

Upstream 100 bases:

>100_bases
CGCGGCGGCTGCGGGTTATGCATTTGGCTGACCTGTCCCCCCGGCGAAGAAATACAATGGGTGATCCCTGGGCTGACTGA
GTCAATTTATTGCCAGCAGG

Downstream 100 bases:

>100_bases
CAGGCTGGCATATTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACATACAAGGTTAAACATGCCTTCGTCCT
CGCATCCCGTAGAACGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQN
YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTL
DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPK
SSH

Sequences:

>Translated_323_residues
MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQN
YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTL
DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPK
SSH
>Mature_323_residues
MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQN
YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTL
DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPK
SSH

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family [H]

Homologues:

Organism=Escherichia coli, GI145693216, Length=286, Percent_Identity=98.2517482517483, Blast_Score=585, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR009722 [H]

Pfam domain/function: PF06977 SdiA-regulated [H]

EC number: NA

Molecular weight: Translated: 35940; Mature: 35940

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISLSKRISVIVILFAIVAV
CCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
CTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIV
HHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCCCCEEECCCCCEEEECCCCCEEEE
EMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKI
EEECCCCEEEEECHHHHHHHHHHHEECCCEEEEECCCCEEEEEEEECCCCCEEEEEEEEC
PLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTL
CCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEECEEECCCEEECHHHHHHHHCCC
DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMD
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCEEEE
ASGNIYIVSEPNRFYRFTPKSSH
CCCCEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISLSKRISVIVILFAIVAV
CCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH
CTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIV
HHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCCCCEEECCCCCEEEECCCCCEEEE
EMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKI
EEECCCCEEEEECHHHHHHHHHHHEECCCEEEEECCCCEEEEEEEECCCCCEEEEEEEEC
PLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTL
CCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEECEEECCCEEECHHHHHHHHCCC
DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEISLTKGSRGLSHNIKQAEGIAMD
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHCCEEEE
ASGNIYIVSEPNRFYRFTPKSSH
CCCCEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA