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The map label for this gene is yjiJ [H]

Identifier: 82546679

GI number: 82546679

Start: 4435442

End: 4436614

Strand: Reverse

Name: yjiJ [H]

Synonym: SBO_4383

Alternate gene names: 82546679

Gene position: 4436614-4435442 (Counterclockwise)

Preceding gene: 82546680

Following gene: 82546677

Centisome position: 98.16

GC content: 53.28

Gene sequence:

>1173_bases
ATGCCTTCGTCCTCGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCTGGTTCTGACCCTAGGTAT
GGGATTAGGTCGCTTCCTTTATACGCCTATGTTGCCCGTCATTATGGCGGAAGGGGCGTTTTCATTTAGCCAGCTCTCGT
GGATTGCCAGCGGCAACTATGCGGGGTATCTGGCTGGCAGTCTGCTATTTTCGTTTGGCGCATTTCACCAGCCGTCGCGC
CTACGCCCATTTCTGTTGGTTTCTGCCCTGGCGAGAGGGTTGTTGATCCTCGCAATGGCATGGTTGCCGCCATTTATTCT
GGTGTTATTGATTCGCTTCCTGGCGGGTGTCGCCAGCGCCGGTATGCTGATTTTTGGTTCGACGCTGATTATGCAGCACA
CGCGCCATCCTTTTGTGCTGGCAGCTTTGTTTTCTGGCGTTGGCATTGCACTGGGCAACGAATATGTTCTGGCAGGCCTG
CATTTTGCCTTCTCCTCGCAAACGTTATGGCAAGGCGCCGGGGCGCTTTCTGGCATGATGCTGATTGCACTTACGCTTTT
AATGCCCTCGAAAAAACACGCCATCGCACCAATGCCATTGGCAAAAACGGAGCAACAGATAATGAGCTGGTGGTTACTGG
CTATTCTGTACGGCCTTGCGGGATTTGGTTATATCATCGTCGCGACTTACCTGCCGCTCATGGCGAAAGATGCAGGCTCA
CCATTGTTAACCGCCCATCTCTGGACGTTAGTCGGCTTATCAATTGTGCCAGGCTGCTTTGGCTGGCTATGGGCAGCAAA
ACGTTGGGGGGCTTTGCCTTGCCTGACGGCGAATTTGCTGGTGCAGGCTATCAGTGTGCTGCTTACTCTCGCCAGCGACT
CTCCTCTCTTGCTTATCATTAGTAGTATCGGTTTTGGCGGTACCTTTATGGGCACGACATCTCTGGTGATGACTATCGCC
CGCCAACTGAGCGTTCCGGGAAATCTCAATCTTTTAGGCTTTGTGACGCTCATTTACGGCATTGGACAAATCCTCGGCCC
GGCGCTGACCAGTATGCTCGGCAATGGAACATCGGCGCTTGCCGGCGCCACTCTCTGCGGCGCGGCGGCGTTGTTTATTG
CTGCGCTTATCAGCACAGTACAATTATTTAAGCTGCAAGTGGTCACTTCATGA

Upstream 100 bases:

>100_bases
TTTTATCGCTTTACCCCTAAATCATCGCATTAACAGGCTGGCATATTTCACCTTTTTGTTATTAACTTGTTAACAACAAA
AATGACATACAAGGTTAAAC

Downstream 100 bases:

>100_bases
GGAGTGTTTCCCTTACCACTCAAGAAATTCGACCGCAACCGTTGATGTCAGCCAGACTCCGTTTTCCGCTTGCCAGAAAG
GAATGCCTCGTTTCGCCATT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR
LRPFLLVSALARGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGS
PLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIA
RQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS

Sequences:

>Translated_390_residues
MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSR
LRPFLLVSALARGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGS
PLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIA
RQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS
>Mature_389_residues
PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRL
RPFLLVSALARGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGLH
FAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGSP
LLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIAR
QLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790788, Length=392, Percent_Identity=96.1734693877551, Blast_Score=704, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010645
- InterPro:   IPR016196 [H]

Pfam domain/function: PF06779 DUF1228 [H]

EC number: NA

Molecular weight: Translated: 41172; Mature: 41041

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
PSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAEGAFSFSQLSWIASGNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
AGYLAGSLLFSFGAFHQPSRLRPFLLVSALARGLLILAMAWLPPFILVLLIRFLAGVASA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGLHFAFSSQTLWQGAGALSGMM
CHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHHH
LIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGS
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
SSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSAL
ECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AGATLCGAAALFIAALISTVQLFKLQVVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]