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The map label for this gene is ytfQ [H]

Identifier: 82546524

GI number: 82546524

Start: 4271466

End: 4272422

Strand: Reverse

Name: ytfQ [H]

Synonym: SBO_4218

Alternate gene names: 82546524

Gene position: 4272422-4271466 (Counterclockwise)

Preceding gene: 82546527

Following gene: 82546523

Centisome position: 94.53

GC content: 49.74

Gene sequence:

>957_bases
ATGTGGAAACGCTTACTTGTAGTCTCTGCAGTCTCGGCAGCCATGTCGTCTATGGCGTTGGCCGCTCCATTAACCGTAGG
ATTTTCGCAGGTCGGATCGGAATCCGGCTGGCGCGCCGCAGAAACCAATGTGGCGAAAAGTGAGGCCGAAAAACGCGGAA
TTACGTTGAAAATTGCCGATGGTCAGCAAAAGCAGGAAAACCGGATTAAAGCGGTACGTTCCTTCGTTGCACAAGGGGTG
GATGCGATCTTTATCGCTCCAGTGGTTGCGACGGGTTGGGAACCGGTATTAAAAGAGGCGAAAGATGCCGAAATCCCGGT
CTTCTTGCTCGACCGTTCCATCGATGTGAAAGACAAATCTCTCTATATGACCACCGTTACTGCCGACAACATCCTCGAAG
GTAAGTTGATCGGTGACTGGCTGGTAAAAGAAGTGAATGGCAAACCATGCAACGTGGTGGAGCTGCAGGGCACCGTTGGG
GCCAGCGTCGCCATTGACCGTAAGAAAGGCTTTGCCGAAGCCATTAAGAATGCGCCAAATATCAAAATTATCCGCTCGCA
GTCAGGTGACTTCACCCGCAGTAAAGGCAAAGAAGTCATGGAGAGCTTTATCAAAGCGGAAAACAACGGCAAAAACATCT
GCATGGTTTACGCCCATAACGACGACATGGTGATTGGTGCAATTCAGGCAATTAAAGAAGCGGGCCTGAAACCGGGCAAA
GATATTCTGACAGGTTCTATCGATGGCGTACCGGATATCTACAAAGCGATGATTGATGGCGAAGCGAACGCCAGTGTTGA
ACTGACGCCGAATATGGCGGGACCCGCTTTTGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGA
CGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAGTTAGAGAAGAAGAAAAATATGGGGTATTGA

Upstream 100 bases:

>100_bases
TGAAGTGTGATGTAACGCAATCCGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTCACCAATAATAATT
ACCCCGACGAGGACAACCCT

Downstream 100 bases:

>100_bases
GGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAT
GCGACGCTTACCGCGTCTTA

Product: LACI-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGV
DAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY

Sequences:

>Translated_318_residues
MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGV
DAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY
>Mature_318_residues
MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGV
DAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK
DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=318, Percent_Identity=99.0566037735849, Blast_Score=641, Evalue=0.0,
Organism=Escherichia coli, GI1790192, Length=276, Percent_Identity=31.8840579710145, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1790526, Length=145, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34341; Mature: 34341

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
GQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCE
LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPN
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCC
IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCC
DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTL
HHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
YLPDTAKEELEKKKNMGY
ECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECC
GQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS
CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCE
LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPN
EEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCHHHHHCCCCC
IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCC
DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTL
HHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEE
YLPDTAKEELEKKKNMGY
ECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]