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The map label for this gene is 82546468

Identifier: 82546468

GI number: 82546468

Start: 4212098

End: 4213168

Strand: Direct

Name: 82546468

Synonym: SBO_4160

Alternate gene names: NA

Gene position: 4212098-4213168 (Clockwise)

Preceding gene: 82546467

Following gene: 82546478

Centisome position: 93.19

GC content: 35.39

Gene sequence:

>1071_bases
ATGGTGAAGTTAGGGGATGTTATTAATGTTCACTACGGAAAAGCATTAAAAGCTGATCAGCGTGTATCGAATGGAAGTGT
CCATGTGTTTGGTAGTTCAGGAATTGTCGGCAACCACGATAAAACGCTTTGCAGCTATCCCACGATAATTATTGGCCGCA
AAGGCAGCGTTGGTGCTATTACCTGGGCTCCAAGCGGAGGCTGGATCATTGATACTGCTTATTACGTTGAGATCAAAGAT
AATAATAAGTTAGATCTCCGATACTTGTTTTATATTCTGAGCGGAATTGATCTCACTAAGAAAACGATTACCACAAGTAT
TCCTGGATTAAATAGAGACGATCTCTATGATACATTTATTAAATTACCACCTTTTGAAGAGCAGAAACGAATTGTGGATC
TTCTCGATAAAGCTGAGGGTATACGCCAAAAACGTGAGCAATCCATCAAACTGGCTGATGATTTTTTGCGTGCTACGTTT
GCTACAATGTATGGGAATCCTATTACAAACCCCAAAAAATGGCCTGTCCATCTTATGGGAGAAATTATTGAATTTAAAGG
TGGAAATCAACCACCTAAAAGTGATTTTATTTTTGAACCTAAACAGGGTTATATTAGATTAGTACAAATTAGAGATTTTA
AATCCGATAAATATGCGACGTACATTCCGCAAGAAAAAGCAAAACGTATTTTCGAAGTTGATGATGTTATGATTGCTCGT
TATGGGCCACCTGTGTTTCAAATACTTAGAGGTTTATCCGGCAGCTACAATGTAGCTTTAATGAAAGCTTCACCCAAAGA
AAATATTAGGAAGGGGTTTATATTCTATCTTCTACAACTTCCGGAATATCATGATGTTGTTGTAAAAAACTCTGAAAGAA
CAGCAGGACAAACCGGTGTAAATCTTGAACTATTAAACAAATTCAATGTTCCCCTCCCACCTATATACTATCAAGATGAG
ATATTAGATAGATTAGCTAGAATTGAAAAATTTAAAGAAAAAATAGAAATATCATTAAATCATTTAGAAATACAATTTTT
ATCACTACAGAAGAGATTAATAGGTTTTTAA

Upstream 100 bases:

>100_bases
AATATGAAGATCCGAAGGTGATATTGAAGCGGTTAAAGGATCTGGAAAAAGAGATTCTGGCGGATTTGGATGAGCTGGAG
GGGATGCTGTGAGTTCGGCG

Downstream 100 bases:

>100_bases
ATCCTTAGTATCGAAATAAACATTAATTTATTATATTAAATTAAGATATTTTAGGAAATTAAGGCGTCACTCTTAGGTAA
CGCCTTTTTTTACTATCTCG

Product: type I restriction-modification system specificity subunit

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System S Subunit; Restriction System DNA Specificity Domain; Type I Restriction- System Specificity Subunit; Type I Restriction DNA Specificity Domain Protein; Type I Restriction- S Subunit; Type I Restriction- System; Type I Restriction Specificity Subunit; Restriction System Type I; Restriction- System Specificity Determinant; Type I Restriction Protein S; Restriction Endonuclease S Subunits-Like Protein; Restriction Endonuclease S Subunit; Type I Restriction Specificity Protein; Restriction Endonuclease S Subunits; Type I Restriction EcoBI Specificity Protein; Type I Restriction EcoEI Specificity Protein; Type I Restriction System Specificity Protein; Type I Restriction S Subunit; Type I Restriction EcoAI Protein; Type I Restriction- System Specificity Determinant; Type I Restriction/; Type I Restriction- System Specificity Determinant Protein; Type I Restriction Ecocificity Protein; Specificity Determinant HsdS-Like; Type I Restriction Ecobi Specificity Protein; Restriction System S Chain-Like Protein; Type I Restriction- System S Subunit Truncation; Type I Restriction; Type I Restriction Specificity Protein HsdS; Type I Restriction DNA Specificity Family Protein; Type I Site-Specific Deoxyribonuclease

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLCSYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKD
NNKLDLRYLFYILSGIDLTKKTITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKYATYIPQEKAKRIFEVDDVMIAR
YGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFYLLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDE
ILDRLARIEKFKEKIEISLNHLEIQFLSLQKRLIGF

Sequences:

>Translated_356_residues
MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLCSYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKD
NNKLDLRYLFYILSGIDLTKKTITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKYATYIPQEKAKRIFEVDDVMIAR
YGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFYLLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDE
ILDRLARIEKFKEKIEISLNHLEIQFLSLQKRLIGF
>Mature_356_residues
MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLCSYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKD
NNKLDLRYLFYILSGIDLTKKTITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKYATYIPQEKAKRIFEVDDVMIAR
YGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFYLLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDE
ILDRLARIEKFKEKIEISLNHLEIQFLSLQKRLIGF

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40653; Mature: 40653

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLCSYPTIIIGRKGSVGAI
CCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCEECCCCCEEECCCEEEEECCCCCEEE
TWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKTITTSIPGLNRDDLYDTFI
EECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH
KLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATFATMYGNPITNPKKWPVHLMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
EIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKYATYIPQEKAKRIFEVDDVMIAR
HHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCEEEEC
YGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFYLLQLPEYHDVVVKNSERTAGQTGV
CCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCC
NLELLNKFNVPLPPIYYQDEILDRLARIEKFKEKIEISLNHLEIQFLSLQKRLIGF
EEEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEEHEEEEHHHHHHHHHCC
>Mature Secondary Structure
MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLCSYPTIIIGRKGSVGAI
CCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCEECCCCCEEECCCEEEEECCCCCEEE
TWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKTITTSIPGLNRDDLYDTFI
EECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH
KLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATFATMYGNPITNPKKWPVHLMG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
EIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKYATYIPQEKAKRIFEVDDVMIAR
HHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHCCEEEEC
YGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFYLLQLPEYHDVVVKNSERTAGQTGV
CCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCC
NLELLNKFNVPLPPIYYQDEILDRLARIEKFKEKIEISLNHLEIQFLSLQKRLIGF
EEEEHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEEHEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA