| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ptsA [H]
Identifier: 82546299
GI number: 82546299
Start: 3998552
End: 4000687
Strand: Reverse
Name: ptsA [H]
Synonym: SBO_3967
Alternate gene names: 82546299
Gene position: 4000687-3998552 (Counterclockwise)
Preceding gene: 82546305
Following gene: 82546298
Centisome position: 88.51
GC content: 54.82
Gene sequence:
>2136_bases GTGTGCAGCGGTAGTGCAGGCGGCATTCTGACGCCGATCTCTTCTTTAGATCTCAATGCGCTGAGTAATCTTCCCGCAGC CAAAGACGTTGACGCCGAGCAATCCGCACTGGAAAATGGCCTGACGCTGGTACTGAAAAACATTGAGTTTCGTCTGCTGG ATAGCGACGGTGCTACCAGCGCGATACTGGAAGCTCACCGATCCCTGGCTGGCGATACATCTTTACGTCAGCACTTACTG ACAGGCGTCAGCGAGGGATTAAGCTGTGCCGAAGCGATTGTCGCCAGTGCGAATCACTTTTGCGAAGAGTTCGCCCGTTC CAGCAGCAGCTACCTGCAAGAACGTGCCCTGGACGTACGCGACGTCTGCTTCCAGTTACTCCAGCAAATCTACGGTGAGC AACGCTTCCCGGCACCGGGCAAACTGACGCAGCCCGCCATTTGTATGGCTGATGAACTGACTCCCAGCCAGTTCCTCGAA CTGGATAAAAATCACCTCAAAGGTCTGTTACTGAAAAGTGGCGGCACCACCTCACATACCGTAATTCTTGCCCGTTCGTT CAACATTCCGACACTGGTTGGTGTAGATATTGATGCCCTTACTCCGTGGCAGCATCAAACGATTTATATCGACGGCAACG CCGGGGCGATTGTGGTTGAGCCAGGGGAAGCCGTGGCCCGTTATTATCAGCAAGAAGCCCGCGTACAGGACGCCCTTCGT GAGCAACAGCGTGTCTGGCTGACCCAACAAGCCCGTACCGCTGACGGTATCCGCATTGAAATTGCCGCTAACATCGCTCA CTCCGTGGAAGCGCAGGCCGCATTCGGCAATGGTGCGGAAGGCGTTGGTTTGTTCCGCACTGAAATGCTCTATATGGATC GCACCAGTGCACCGGGCGAAAGCGAGCTGTACAACATTTTTTGTCAGGCGCTGGAGTCTGCCAACGGACGCAGCATTATT GTGCGCACTATGGACATTGGCGGCGACAAACCCGTTGATTATCTGAACATTCCGGCAGAAGCTAACCCGTTCCTCGGTTA TCGCGCTGTGCGTATTTATGAAGAATACGCCTCGCTGTTCACCACACAACTACGGTCGATCCTGCGCGCCTCCGCTCACG GCAGCCTGAAAATCATGATCCCGATGATCTCCTCAATGGAAGAGATCTTATGGGTGAAAGAAAAACTGGCGGAAGCCAAA CAGCAACTGCGTAACGAACACATTCCGTTTGATGAGAAGATCCAGCTTGGCATTATGCTGGAAGTACCGTCGGTGATGTT CATCATCGATCAATGCTGCGAAGAGATTGATTTCTTTAGTATTGGTAGTAATGACCTGACGCAATATCTGCTGGCAGTGG ATCGCGATAACGCTAAGGTTACTCGTCACTACAACAGCCTGAATCCGGCATTCTTGCGGGCGCTCGATTACGCCGTGCAG GCGGTGCATCGCCAGGGCAAATGGATTGGTCTGTGCGGTGAGCTGGGAGCGAAAGGTTCCGTGCTGCCGTTGCTGGTCGG CTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGGCGGCGAAAGCGCGGATGACGCAACTTGATAGCCGTG AGTGCCGCAAGTTGCTCAACCAGGCAATGGCCTGCCGTACTTCGCTGGAAGTGGAACACCTGCTGGCGCAATTCCGCATG ACCCAACAGGACGCACCGCTGGTCACCGCCGAGTGCATCACGCTGGAAAGTGACTGGCGCAGCAAAGAAGAAGTGCTCAA AGGCATGACCGATAACCTGCTGCTGGCGGGCCGCTGCCGCTATCCGCGTAAACTGGAAGCCGACTTATGGGCGCGCGAGG CCGTTTTCTCTACCGGTCTGGGCTTTAGTTTTGCCATTCCACACAGCAAATCAGAACACATTGAGCAATCCACCATCAGC GTGGCGCGTCTGCAAGCGCCGGTGCGCTGGGGCGATGATGAAGCGCAATTCATCATTATGTTAACCCTGAACAAACACGC TGCGGGCGATCAGCACATGCGCATTTTCTCTCGCCTCGCTCGCCGCATCATGCACGAAGAATTCCGTAACGCGCTGGTTA ACGCCGCCTCTGCCGACGCTATCGCCAGCCTGCTGCAACATGAACTGGAACTGTAA
Upstream 100 bases:
>100_bases CCACTGCGATGCGCCGCTGGCGGAAGTTAAATCTGACGAACTGGAACCACTGCCGGTTTCACTGACCAATCTGAATCCGC AAATTATCCGCGCCCGCACC
Downstream 100 bases:
>100_bases AAGGAAACATCATGGAACTGTATCTGGACACCGCTAACGTCGCAGAAGTCGAACGTCTGGCACGCATATTCCCCATTGCC GGGGTGACAACTAACCCGAG
Product: PEP-protein phosphotransferase system enzyme I
Products: NA
Alternate protein names: MTP 2; Phosphoenolpyruvate-protein phosphotransferase; Enzyme I-Ani; Phosphotransferase system enzyme I; Phosphocarrier protein HPr; Protein H; Fructose-like phosphotransferase enzyme IIA component; PTS system fructose-like EIIA component [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLL TGVSEGLSCAEAIVASANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLE LDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALR EQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSII VRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAK QQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQ AVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTIS VARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL
Sequences:
>Translated_711_residues MCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLL TGVSEGLSCAEAIVASANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLE LDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALR EQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSII VRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAK QQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQ AVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTIS VARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL >Mature_711_residues MCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLL TGVSEGLSCAEAIVASANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLE LDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALR EQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSII VRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAK QQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQ AVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTIS VARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI48994992, Length=711, Percent_Identity=98.7341772151899, Blast_Score=1443, Evalue=0.0, Organism=Escherichia coli, GI1788726, Length=714, Percent_Identity=45.7983193277311, Blast_Score=604, Evalue=1e-174, Organism=Escherichia coli, GI1788756, Length=458, Percent_Identity=39.5196506550218, Blast_Score=332, Evalue=4e-92, Organism=Escherichia coli, GI1789193, Length=502, Percent_Identity=33.4661354581673, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787994, Length=217, Percent_Identity=29.9539170506912, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1786951, Length=153, Percent_Identity=24.8366013071895, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF00381 PTS-HPr; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 78499; Mature: 78499
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALENGLTLVLKNIEFRLLDSDGATS CCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCEEEEECCCCCHH AILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVASANHFCEEFARSSSSYLQERALDVR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHH DVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHT HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCHHHHCEEEEECCCCCCEE VILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALR EEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHH EQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGE HHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCH SELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLF HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH TTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIML HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE EVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQ ECHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCEEHHCCCCCHHHHHHHHHHHH AVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLN HHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH QAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCR HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCC YPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIM CCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE LTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALENGLTLVLKNIEFRLLDSDGATS CCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCEEEEECCCCCHH AILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVASANHFCEEFARSSSSYLQERALDVR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHH DVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHT HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCHHHHCEEEEECCCCCCEE VILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALR EEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHH EQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGE HHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCH SELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLF HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH TTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIML HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE EVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQ ECHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCCEEHHCCCCCHHHHHHHHHHHH AVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLN HHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHH QAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCR HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCEEEECCCC YPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIM CCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE LTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]