| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is frlA [H]
Identifier: 82545727
GI number: 82545727
Start: 3341905
End: 3343293
Strand: Direct
Name: frlA [H]
Synonym: SBO_3358
Alternate gene names: 82545727
Gene position: 3341905-3343293 (Clockwise)
Preceding gene: 82545726
Following gene: 82545728
Centisome position: 73.94
GC content: 54.21
Gene sequence:
>1389_bases ATGACTGCAAACTCTCCCCTACAACGTGTTGGACAAGAAAAAGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCT CGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAA AAGCAGCGGGCACGCCGTGGCTTACGGTGCTCACGTTTGTCATTGGCGGGTTAATTGTGATCCCGCAAATGTGCGTCTAT GCGGAACTATCCACCGCTTATCCGGAAAATGGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTT CCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTG GCTTTTTAACGCCTATCGATCCGTTGCCCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTG CGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTAATTACCATCGCCAAAATTATCCCGTTCACTATCGTCATTGGCCT TGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGC TGCTGGCGGGGATCTCTGCCACCAGTTGGTCGTATACCGGCATGGCCTCTATCTGTTATATGACCGGCGAAATTAAAAAC CCCGGAAAAACCATGCCACGAGCGCTGATTGGTTCCTGTCTGCTGGTTCTGGTGCTCTACACCCTGCTGGCGCTGGTGAT TTCCGACCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCG GCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGTACCAG CCGCGGCTGGAATACGCGATGGCGAAAGACAACCTGTTCTTTAAATGCTTCGGCCATGTGCATCCGAAATACAACACGCC GGATGTCTCCATCATCCTGCAAGGGGCGCTGGGGCTCTTCTTCATCTTCGTTTCCGATCTCACCAGCCTGCTGGGTTATT TCACCCTGGTGATGTGTTTCAAAAATACCCTCACCTTCGGCTCCATCATCTGGTGTCGTAAACGCGACGATTACAAACCG CTGTGGCGTACTCCTGCTTTCGGGCTGATGACCACCCTCGCCATTGCGTCAAGCCTCATTCTGGTCGCCTCAACCTTTGT CTGGGCACCGATTCCCGGCCTTATCTGCGCCGTCATCGTTATTGCTACTGGTCTGCCTGCTTACGCCTTCTGGGCGAAGC GTAGCCGCCAGCTCAACGCTTTGTCGTAA
Upstream 100 bases:
>100_bases AGCCACAGCGCGATCCTGTGCGAAATTTTGTGATCTTCCTCCGCATTACATAACATCATATGTTATTATATTCATCATGC ATTGTCATGTTACCTTTTAA
Downstream 100 bases:
>100_bases TGTTATCTGGAGAAAATAAAATGTTGGATATTGATAAAAGCACCGTGGACTTTCTGGTCACCGAAAATATGGTTCAGGAA GTGGAAAAAGTTCTCAGCCA
Product: fructoselysine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVY AELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKN PGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQ PRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKP LWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS
Sequences:
>Translated_462_residues MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVY AELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKN PGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQ PRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKP LWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS >Mature_461_residues TANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVYA ELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHLR SVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNP GKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQP RLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPL WRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS
Specific function: May be involved in fructoselysine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=454, Percent_Identity=26.431718061674, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI7657591, Length=454, Percent_Identity=26.431718061674, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI115648063, Length=409, Percent_Identity=22.9828850855746, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI115648022, Length=409, Percent_Identity=22.9828850855746, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI71979932, Length=477, Percent_Identity=26.4150943396226, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI186910308, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI186910306, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI186910304, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI33286428, Length=466, Percent_Identity=24.4635193133047, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI7657683, Length=476, Percent_Identity=25, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI110347453, Length=368, Percent_Identity=26.6304347826087, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI181337167, Length=351, Percent_Identity=23.9316239316239, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI4507047, Length=166, Percent_Identity=27.710843373494, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI258614003, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI258614005, Length=174, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI9790235, Length=468, Percent_Identity=22.6495726495727, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI114326544, Length=192, Percent_Identity=23.4375, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI114326550, Length=192, Percent_Identity=23.4375, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87082250, Length=445, Percent_Identity=99.1011235955056, Blast_Score=879, Evalue=0.0, Organism=Escherichia coli, GI2367353, Length=349, Percent_Identity=28.9398280802292, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI87082023, Length=396, Percent_Identity=26.5151515151515, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790575, Length=324, Percent_Identity=27.1604938271605, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788480, Length=272, Percent_Identity=27.2058823529412, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87081869, Length=412, Percent_Identity=23.3009708737864, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081708, Length=369, Percent_Identity=23.5772357723577, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI48994972, Length=321, Percent_Identity=28.3489096573209, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995382, Length=389, Percent_Identity=26.9922879177378, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71995388, Length=389, Percent_Identity=26.9922879177378, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71982608, Length=418, Percent_Identity=25.1196172248804, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71982612, Length=418, Percent_Identity=25.1196172248804, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71993915, Length=388, Percent_Identity=24.7422680412371, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI32566699, Length=375, Percent_Identity=24.2666666666667, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71990446, Length=426, Percent_Identity=24.4131455399061, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17532491, Length=421, Percent_Identity=22.8028503562945, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17531343, Length=415, Percent_Identity=23.1325301204819, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17540018, Length=425, Percent_Identity=24.9411764705882, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32566695, Length=392, Percent_Identity=23.2142857142857, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193208714, Length=391, Percent_Identity=23.2736572890026, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71982623, Length=283, Percent_Identity=25.4416961130742, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17533459, Length=399, Percent_Identity=23.0576441102757, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17568033, Length=363, Percent_Identity=24.7933884297521, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321492, Length=356, Percent_Identity=23.5955056179775, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24667468, Length=402, Percent_Identity=26.1194029850746, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24641995, Length=383, Percent_Identity=26.1096605744125, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24641993, Length=383, Percent_Identity=26.1096605744125, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI21357367, Length=443, Percent_Identity=25.7336343115124, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651635, Length=366, Percent_Identity=25.4098360655738, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24651633, Length=366, Percent_Identity=25.4098360655738, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI221331183, Length=402, Percent_Identity=24.8756218905473, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI17647653, Length=402, Percent_Identity=24.8756218905473, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24664379, Length=402, Percent_Identity=24.8756218905473, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24666159, Length=450, Percent_Identity=23.3333333333333, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI221512776, Length=450, Percent_Identity=23.3333333333333, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI45550968, Length=462, Percent_Identity=24.8917748917749, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI19921172, Length=462, Percent_Identity=24.8917748917749, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI281366235, Length=406, Percent_Identity=25.3694581280788, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI116007820, Length=406, Percent_Identity=25.3694581280788, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI116007818, Length=413, Percent_Identity=25.6658595641646, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI85725152, Length=413, Percent_Identity=25.6658595641646, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24668806, Length=412, Percent_Identity=22.3300970873786, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356285, Length=412, Percent_Identity=22.3300970873786, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24668802, Length=412, Percent_Identity=22.3300970873786, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI161077963, Length=364, Percent_Identity=22.8021978021978, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49431; Mature: 49300
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPW CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCHH LTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC SLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIP CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKN HHHHHHHHHHHEECCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHEECCCCC PGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKLANSETPISDALTWIPALGSTAGIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHH VAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGLF HHHHHHHHHHHHHHHHHEECCHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH FIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMTTLAIASSLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS HHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPW CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCHH LTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC SLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIP CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKN HHHHHHHHHHHEECCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHEECCCCC PGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKLANSETPISDALTWIPALGSTAGIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHH VAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGLF HHHHHHHHHHHHHHHHHEECCHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH FIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMTTLAIASSLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS HHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]