| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is 82545168
Identifier: 82545168
GI number: 82545168
Start: 2771180
End: 2771749
Strand: Direct
Name: 82545168
Synonym: SBO_2761
Alternate gene names: NA
Gene position: 2771180-2771749 (Clockwise)
Preceding gene: 82545167
Following gene: 82545169
Centisome position: 61.31
GC content: 54.04
Gene sequence:
>570_bases ATGAGTATTGTAAAAGATGAGCATAAAGTTGCGCTGCGTAAATGGCATGAAGAGTTGCAGGATAAACGCGGCGAGCGTGC CAGTCTGCGGCGTAGTACGACGGTTAATGATGTTTGTCTGACGGATGGATTTCGCCTGTTTCTTAAGAACAGACAAATAA AGTGGCAGGATGAACCCGAGTGGCGTATCACCGCACTAGCGCTGATAGCAGCAGTTAGCGCCAATGTTAAAGCTATTGAC GAACGGCAGCCTTTTGCCGCGCAACTGGCGGCGGTAATGAAAAAGGGGCGGTTTACTCGTTTGTTGGCAGTAAAAACGCC GGATGATTTATTGCGGCAGTTACGCCGTGCGGTCAAATTATTAAACGGTTCCGTCAATCTTGACTCTCTAGAAGAGGGGG TCTTCCGCTGGTGCCAGGAGAGCGATGACCTGCTCAATCATCACCGCCGCCAGCAGCGACCAACAGAATTTATCCGTATC CGCTGGGCGCTGGGCGCTGGGCGCTGGGCGCTGGGCGCTGGGCGCTGGGCGCTGGGCGCTGGAATATTACCAGGCTGGCG ACGCCGATAA
Upstream 100 bases:
>100_bases ATTTGGAACGCGTCATGACCGCACGCAAGAAATATTTTACAACATCAGCGGAGAAGCAAAATGCTAACGCCGCCAGGGAG AAAAAGCAGGAGGCTGCTGA
Downstream 100 bases:
>100_bases CGAACAAAATTAATAAAGGACTATCTCATGACAACATTTATTCAGCTTCATTTGTTAACCGCTTACCCTGCTGCCAATCT TAACCGTGATGATTCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cse2 Family CRISPR-Associated Protein; CRISPR-Associated Cse2 Family Protein; Transposase; CRISPR-Associated Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAID ERQPFAAQLAAVMKKGRFTRLLAVKTPDDLLRQLRRAVKLLNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRI RWALGAGRWALGAGRWALGAGILPGWRRR
Sequences:
>Translated_189_residues MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAID ERQPFAAQLAAVMKKGRFTRLLAVKTPDDLLRQLRRAVKLLNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRI RWALGAGRWALGAGRWALGAGILPGWRRR >Mature_188_residues SIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDE RQPFAAQLAAVMKKGRFTRLLAVKTPDDLLRQLRRAVKLLNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRIR WALGAGRWALGAGRWALGAGILPGWRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21868; Mature: 21736
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPE CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC WRITALALIAAVSANVKAIDERQPFAAQLAAVMKKGRFTRLLAVKTPDDLLRQLRRAVKL HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH LNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALGAGRWALGAGRWALGA HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCHHHCC GILPGWRRR CCCCCCCCC >Mature Secondary Structure SIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPE CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC WRITALALIAAVSANVKAIDERQPFAAQLAAVMKKGRFTRLLAVKTPDDLLRQLRRAVKL HHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH LNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALGAGRWALGAGRWALGA HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCHHHCC GILPGWRRR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA