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The map label for this gene is sacT [H]

Identifier: 82545117

GI number: 82545117

Start: 2709408

End: 2710055

Strand: Reverse

Name: sacT [H]

Synonym: SBO_2706

Alternate gene names: 82545117

Gene position: 2710055-2709408 (Counterclockwise)

Preceding gene: 82545118

Following gene: 82545116

Centisome position: 59.96

GC content: 32.41

Gene sequence:

>648_bases
TTGATTGAGCATGTGGGTATTGAGTATATTTTTGTTGCCGAAAAGATAGTGCATTATGCGGAGAGTAATCTCGAAAAAAA
ACTCAATCCATCGCTACTACTGATTCTTGCTGATCACATTTCGAATGCAATATCCCGAGTCGTCTCAGGCATACAAATTA
ATAATGTTTTCCTTGAGGAAATCAAAGCGTTGTACAAAGCAGAGTATGCAATAAGTCGTGATGCATTAACAATCATTAAT
GAGCAATTTAGCGTTCAACTACCGGATGATGAGATTGGTTTTATAGCATTGCATATTTTAAATAATTATGAAAATTCAGT
TGATTATGAATCAGTAAGGATTATTGAGCTGTCTCAAAAAATCACGGAGCTTATTGAAGTTGTTTATAACAGAAGGGTGG
ACAGAAGTTCATTTAACTATTCCAGATTTATGATGCACCTTAAATATTTTTCTAGTCGTGTGTTATGTAATGAAAAAATA
AAACAGAAAAATATTGGTGATATCTATGAGCAGTTTCTTGAAAAAGATTTTCAGTTACAACGTGCCATTCATGAAATTGA
AAGATATCTGTACGCAACTTTTAAATATGATTTGATTCTGGAAGAGAAACTATATCTTTCTACTCGCATCAAAGTATTAA
TGGACTAA

Upstream 100 bases:

>100_bases
CTGGCGTTGGTTACAATAAAAATATGGTATGTCGGTCCCTGAGCATCCTGCCAAACCGGATTTTTATGTCAGAAATGAGC
AAAAAAATAAACTCTACAAA

Downstream 100 bases:

>100_bases
TTATACATAACATTTTCATGAGATAACCAGTATGAAACAAAAGAAATCCTGGAGTTTTTTTCAGAGCCTGGGGAAGGCAT
TTATGTATCCCATCGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIEHVGIEYIFVAEKIVHYAESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEEIKALYKAEYAISRDALTIIN
EQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQKITELIEVVYNRRVDRSSFNYSRFMMHLKYFSSRVLCNEKI
KQKNIGDIYEQFLEKDFQLQRAIHEIERYLYATFKYDLILEEKLYLSTRIKVLMD

Sequences:

>Translated_215_residues
MIEHVGIEYIFVAEKIVHYAESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEEIKALYKAEYAISRDALTIIN
EQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQKITELIEVVYNRRVDRSSFNYSRFMMHLKYFSSRVLCNEKI
KQKNIGDIYEQFLEKDFQLQRAIHEIERYLYATFKYDLILEEKLYLSTRIKVLMD
>Mature_215_residues
MIEHVGIEYIFVAEKIVHYAESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEEIKALYKAEYAISRDALTIIN
EQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQKITELIEVVYNRRVDRSSFNYSRFMMHLKYFSSRVLCNEKI
KQKNIGDIYEQFLEKDFQLQRAIHEIERYLYATFKYDLILEEKLYLSTRIKVLMD

Specific function: Mediates positive regulation of the sacPA operon by functioning as an antiterminator factor of transcription [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=155, Percent_Identity=30.9677419354839, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 25399; Mature: 25399

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEHVGIEYIFVAEKIVHYAESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHH
IKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQK
HHHHHHHHHHHCCCHHHHCCCCEEEECCCCCHHHEEEEEHHCCCCCCCHHHHHHHHHHHH
ITELIEVVYNRRVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQKNIGDIYEQFLEKDFQLQ
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RAIHEIERYLYATFKYDLILEEKLYLSTRIKVLMD
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHEECC
>Mature Secondary Structure
MIEHVGIEYIFVAEKIVHYAESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHH
IKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQK
HHHHHHHHHHHCCCHHHHCCCCEEEECCCCCHHHEEEEEHHCCCCCCCHHHHHHHHHHHH
ITELIEVVYNRRVDRSSFNYSRFMMHLKYFSSRVLCNEKIKQKNIGDIYEQFLEKDFQLQ
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RAIHEIERYLYATFKYDLILEEKLYLSTRIKVLMD
HHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2163394; 7934828; 9384377 [H]