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The map label for this gene is torR [H]

Identifier: 82544682

GI number: 82544682

Start: 2223178

End: 2223870

Strand: Direct

Name: torR [H]

Synonym: SBO_2236

Alternate gene names: 82544682

Gene position: 2223178-2223870 (Clockwise)

Preceding gene: 82544679

Following gene: 161984909

Centisome position: 49.19

GC content: 52.38

Gene sequence:

>693_bases
ATGCCACATCACATTGTTATTGTTGAAGATGAGCCGGTTACCCAGGCGCGATTACAATCTTACTTCACTCAGGAGGGGTA
TACCGTTTCCGTTACAGCGAGCGGTGCCGGGCTGCGGGAAATTATGCAGAATCAGCCGGTAGATTTAATTCTGCTGGATA
TCAACTTACCCGATGAAAATGGCCTGATGTTAACCCGCGCCCTGCGAGAACGCTCAACGGTGGGGATTATTCTGGTTACC
GGACGCAGCGATCGGATTGACCGTATTGTTGGGCTGGAAATGGGCGCAGACGATTACGTCACCAAACCGCTGGAACTGCG
CGAACTGGTAGTACGGGTGAAAAATCTGCTCTGGCGAATCGACCTCGCGCGACAAGCTCAACCGCACACTCAGGACAACT
GCTATCGCTTTGCCGGTTATTGCCTGAATGTGTCGCGCCATACGCTGGAGCGGGATGGCGAGCCGATTAAACTGACCCGC
GCAGAGTATGAAATGTTGGTGGCATTTGTGACGAATCCGGGCGAAATTCTCAGCCGTGAACGTCTGCTACGTATGCTTTC
TGCGCGTCGGGTGGAAAACCCTGACCTGCGCACCGTCGATGTGTTAATTCGTCGTTTACGTCATAAACTCAGCGCGGATT
TACTGGTGACGCAACATGGTGAATGTTATTTCTTAGCCGCTGATGTGTGCTGA

Upstream 100 bases:

>100_bases
TGGTTTAGTGAAGCGATCTTAATGAGCAAATATGAACAGCGGCACTGGTCAGGATGAACGGCTTACGGCAGAATATGAAC
AGAATGAGTAAAACCCTCTG

Downstream 100 bases:

>100_bases
TAAAAATAGACCGGACGAAATCCCCCTGGTGACAGCGAGCGGCGAATATGTTCACGGTCGGCATTTTTCGGCGTCAGAAC
TAAAATCGGTGGGCTGACAT

Product: DNA-binding transcriptional regulator TorR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVT
GRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGECYFLAADVC

Sequences:

>Translated_230_residues
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVT
GRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGECYFLAADVC
>Mature_229_residues
PHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTG
RSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRA
EYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGECYFLAADVC

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Phosphorylated torR activates the transcription of the torCAD operon by binding to four decameric boxes located in the torCAD p

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=99.1304347826087, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=42.0600858369099, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI1789809, Length=212, Percent_Identity=34.9056603773585, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=35.1931330472103, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790860, Length=209, Percent_Identity=33.9712918660287, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1786599, Length=214, Percent_Identity=33.6448598130841, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=31.7180616740088, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=29.8245614035088, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786911, Length=212, Percent_Identity=30.6603773584906, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI2367329, Length=209, Percent_Identity=33.0143540669856, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=29.0748898678414, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=27.8026905829596, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=30.2222222222222, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI145693140, Length=211, Percent_Identity=29.8578199052133, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26290; Mature: 26159

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDEN
CCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCC
GLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRI
CCHHHHHHHHCCCEEEEEEECCCCCCHHEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHH
DLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRE
HHHHCCCCCCCCCHHEEHHHEECCHHHHHHCCCCCEEEEHHHEEEEEEEECCCHHHHHHH
RLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGECYFLAADVC
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCC
>Mature Secondary Structure 
PHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDEN
CCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCC
GLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRI
CCHHHHHHHHCCCEEEEEEECCCCCCHHEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHH
DLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRE
HHHHCCCCCCCCCHHEEHHHEECCHHHHHHCCCCCEEEEHHHEEEEEEEECCCHHHHHHH
RLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGECYFLAADVC
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]