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The map label for this gene is yccD

Identifier: 82544679

GI number: 82544679

Start: 2218312

End: 2218617

Strand: Direct

Name: yccD

Synonym: SBO_2232

Alternate gene names: 82544679

Gene position: 2218312-2218617 (Clockwise)

Preceding gene: 82544678

Following gene: 82544682

Centisome position: 49.08

GC content: 53.59

Gene sequence:

>306_bases
ATGGCTAATGTTACGGTGACTTTTACTATTACCGAATTTTGCCTGCATACCGGCATCTCTGAAGAGGAGTTGAATGAAAT
TGTCGGTTTGGGGGTGGTTGAACCGCGTGAGATCCAGGAAACAACCTGGGTATTTGACGACCATGCCGCCATTGTGGTGC
AACGCGCGGTACGCCTGCGTCATGAACTGGCTCTGGACTGGCCGGGGATCGCGGTGGCGCTGACGTTAATGGATGATATT
GCACACCTGAAGCAGGAAAACCGCCTGCTACGCCAGCGGCTTTCCCGGTTTGTAGCTCATCCGTGA

Upstream 100 bases:

>100_bases
TGATGCCGCCGAAACCGGATGAAAACACTGCCGCGCTGTGGCAGCAACTGGCAGACGCCCAGTCGTCTTTTGATCCACGT
AAAGATTGGGGGAAAGCATG

Downstream 100 bases:

>100_bases
TGTGTGTTTGCCGGATGTGATGACGCATCCGGCAACTGCGCCATAATGCCTGATGCGACGCTAAACGCGTCTTTTCAGGC
GCATAAACGACGTTATTTGT

Product: chaperone-modulator protein CbpM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDI
AHLKQENRLLRQRLSRFVAHP

Sequences:

>Translated_101_residues
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDI
AHLKQENRLLRQRLSRFVAHP
>Mature_100_residues
ANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIA
HLKQENRLLRQRLSRFVAHP

Specific function: Interacts with CbpA and inhibits both the DnaJ-like co- chaperone activity and the DNA binding activity of CbpA. Together with CbpA, modulates the activity of the DnaK chaperone system. Does not inhibit the co-chaperone activity of DnaJ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbpM family

Homologues:

Organism=Escherichia coli, GI1787234, Length=101, Percent_Identity=100, Blast_Score=205, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CBPM_ECO24 (A7ZKA4)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462233.1
- ProteinModelPortal:   A7ZKA4
- SMR:   A7ZKA4
- STRING:   A7ZKA4
- EnsemblBacteria:   EBESCT00000018850
- GeneID:   5589569
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1117
- eggNOG:   NOG40214
- GeneTree:   EBGT00050000011063
- HOGENOM:   HBG416362
- OMA:   LELEWEG
- ProtClustDB:   PRK10265
- BioCyc:   ECOL331111:ECE24377A_1117-MONOMER
- HAMAP:   MF_01155
- InterPro:   IPR022835

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11512; Mature: 11381

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLR
CCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHH
HELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLR
CCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHH
HELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA