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The map label for this gene is rhmT [H]

Identifier: 82544510

GI number: 82544510

Start: 2019627

End: 2020955

Strand: Direct

Name: rhmT [H]

Synonym: SBO_2048

Alternate gene names: 82544510

Gene position: 2019627-2020955 (Clockwise)

Preceding gene: 82544509

Following gene: 82544511

Centisome position: 44.68

GC content: 52.45

Gene sequence:

>1329_bases
GTGACAACGGTAACGCCCACATATTCTAAGGAGCTTTTTATGAGCACCGCTTTGCTTGACGCCGTGGTGAAGAAAAACCG
TGTGCGTTTAATTCCGTTTATGTTGGCGCTGTATGTGCTGGCGTTTCTCGACCGTTCGAATATCGGTTTTGCCAAACAGA
CCTACCAGATTGATACCGGGTTGAGTAATGAAGCTTATGCGCTGGGAGCAGGCATTTTCTTTGTGGTATATGCGTTTCTG
GGGGTTCCGGCGAATCTTTTGATGCGCAAACTGGGGGCCAGAACCTGGATTGGTACGACAACACTGCTGTGGGGATTTCT
TTCGGCAGCCATGGCATGGGCCGATACTGAAGCGAAATTTCTGATAGTTCGCACTCTGCTTGGTGCTGCGGAGGCCGGAT
TTTTCCCTGGTATGATTTATCTCACCTCGCAATGGTTTCCGCAGCGTAATCGCGCCAGCATTATGGGGCTGTTCTATATG
GGCGCACCGCTGGCGTTAACACTGGGATCACCGCTTTCCGGCGCGCTGTTGGAGATGCATGGATTTATGGGGCATCCCGG
CTGGTTCTGGATGTTTGTGATTGAAGGATTGTTGGCAGTCGGTGCTGGGGTATTCACATTCTTTTGGCTTGATGACACAC
CGGAGCAGGCACGTTTTCTGAGTAAACAAGAAAAAACGTTGCTTATCAATCAACTGGCAAGTGAAGAACAACAGAAAGTG
ACTTCTCGGCTGAGCGATGCGCTGCGTAATGGCCGAGTCTGGCAACTAGCGATTATCTACCTGACCATTCAGGTGGCGGT
TTACGGATTAATTTTCTTCCTGCCGACCCAGGTTGCGGCATTGCTGGGAACAAAAGTGGGCTTTACAGCGTCGGTGGTCA
CCGCCATTCCGTGGGTTGCGGCCTTGTTTGGGACCTGGCTTATTCCGCGCTATTCCGATAAAACCGGCGAACGGCGTAAT
GTCGCAGCGCTGACATTACTGGCGGCGGGCATTGGTATTGGTCTGTCCGGGCTGCTTTCTCCAGTAATGGCGATCGTAGC
GCTGTGTGTTGCAGCTATCGGGTTTATTGCCGTGCAGCCGGTGTTCTGGACGATGCCGACACAACTGCTTTCCGGTACGG
CGCTGGCTGCGGGGATTGGTTTTGTAAACCTGTTTGGTGCAGTGGGCGGGTTTATTGCCCCGATCCTGCGCGTGAAAGCA
GAAACGTTATTTGCCAGCGATGCGGCAGGATTACTGACACTGGCAGCGGTGGCGGTCATCGGTTCGCTGATTATTTTCAC
TCTGCGTGTAAATCGTACTGTTGCGCAGACCGACGTGGCACATCATTAA

Upstream 100 bases:

>100_bases
TTCATAAATCAGTGCTTGATAAACCCGGTTTTGGCGTCGAACTCAATCGTGACTGCAATTTGAAACGCCCCTACAGCCAC
TAATCACTCCGGGCGTTGCT

Downstream 100 bases:

>100_bases
ATAGGTTAAGGAACACGATGAACGCATTATTAACCAATCCCTTTAAAGAACGTTTACGCAAGGGCGAAGTGCAAATTGGT
CTGTGGTTAAGCTCGACTAC

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MTTVTPTYSKELFMSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFL
GVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYM
GAPLALTLGSPLSGALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKV
TSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRN
VAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKA
ETLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH

Sequences:

>Translated_442_residues
MTTVTPTYSKELFMSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFL
GVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYM
GAPLALTLGSPLSGALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKV
TSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRN
VAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKA
ETLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH
>Mature_441_residues
TTVTPTYSKELFMSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLG
VPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMG
APLALTLGSPLSGALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVT
SRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNV
AALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAE
TLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=423, Percent_Identity=25.0591016548463, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87082071, Length=429, Percent_Identity=99.7668997668998, Blast_Score=846, Evalue=0.0,
Organism=Escherichia coli, GI2367193, Length=441, Percent_Identity=23.5827664399093, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87082320, Length=423, Percent_Identity=21.9858156028369, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI2367379, Length=308, Percent_Identity=21.1038961038961, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789152, Length=421, Percent_Identity=23.9904988123515, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71991453, Length=335, Percent_Identity=25.9701492537313, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71991448, Length=335, Percent_Identity=25.9701492537313, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=231, Percent_Identity=26.8398268398268, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323032, Length=222, Percent_Identity=29.2792792792793, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321698, Length=281, Percent_Identity=24.5551601423488, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6322612, Length=271, Percent_Identity=22.5092250922509, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI20130167, Length=361, Percent_Identity=25.207756232687, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47695; Mature: 47564

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVTPTYSKELFMSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTG
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCC
LSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMH
HHHHHHHHHHHCCCCCCHHEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHH
GFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKV
HCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQP
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLLTLAAVAVI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GSLIIFTLRVNRTVAQTDVAHH
HHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
TTVTPTYSKELFMSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTG
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCC
LSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKF
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMH
HHHHHHHHHHHCCCCCCHHEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHH
GFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKV
HCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQP
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLLTLAAVAVI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GSLIIFTLRVNRTVAQTDVAHH
HHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]