| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is flgL [H]
Identifier: 82544452
GI number: 82544452
Start: 1955790
End: 1956743
Strand: Reverse
Name: flgL [H]
Synonym: SBO_1981
Alternate gene names: 82544452
Gene position: 1956743-1955790 (Counterclockwise)
Preceding gene: 82544453
Following gene: 82544450
Centisome position: 43.29
GC content: 50.94
Gene sequence:
>954_bases ATGCGTTTCAGTACCCAGATGATGTACCAGCAAAACATGCGTGGCATCACCAATTCTCAGGCGGAATGGATGAAGTACGG CGAGCAGATGTCGACAGGTAAGCGAGTCGTTAACCCTTCTGACGATCCCATTGCAGCATCACAAGCCGTAGTTCTCTCCC AGGCACAGGCGCAAAACAGCCAGTACACGCTGGCGCGTACTTTCGCCATTCAAAAAGTGTCACTGGAAGAGAGTGTACTT AGCCAGGTCACCACTGCTATCCAGAATGCTCAGGAAAAAATTGTCTACGCCAGCAATGGCACCTTGAGTGACGATGACCG GGCCTCGCTGGCTATGGATATTCAGGGGCTTCGTGACCAGTTGCTGAATCTGGCGAACACCACTGACGGTAACGGGCGCT ACATTTTTGCCGGTTATAAAACAGAGACTGCGCCGTTTAGCGAAGAGAAAGGGAAATACGTCGGTGGAGCAGAAAGTATT AAGCAACAGGTCGATGCTTCGCGTTCGATGGTGATAGGGCACACGGGTGACAAAATTTTCGACAGTATTACCAGCAACGC AGTTGCGGAGCCAGACGGTAGCGCTTCTGAAACCAATCTTTTTGCCATGCTGGATAGCGCCATCGCAGCCCTGAAAACGC CGGTCGCGGATAGCGAAGCGGATAAAGAAATCGCCGCTGCGGCATTGGATAAAACCAACCGTGGACTGAAAAACTCGCTG AATAATGTCCTTGCCGTTCGCGCGGAATTAGGCACGCAGCTGAACGAACTGGAGTCGCTGGATTCCTTAGGTAGCGATCG CGCTTTAGGGCAAACGCAGCAGATGAGCGATCTGGTTGATGTGGACTGGAATGCAACTATTTCATCTTACATCATGCAGC AAACGGCATTGCAGGCATCGTATAAAGCATTTACCGATATGCAGGGATTGTCGCTCTTCCAGCTCAACAAATAA
Upstream 100 bases:
>100_bases TGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAAC ATTCGCTAAGGGGAGATAAG
Downstream 100 bases:
>100_bases GCTCGCTTTAAAACATATCATGAAACTGGGTATGTTTTGTCTGCCCGCTCAGGGATCGCCGGGGCGGGCATTTTTTTTGC CTATTTTGCATTGTTGGTTA
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVL SQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK
Sequences:
>Translated_317_residues MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVL SQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK >Mature_317_residues MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVL SQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=317, Percent_Identity=98.4227129337539, Blast_Score=634, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 34333; Mature: 34333
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC QYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF HHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECCCHHHH DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YKAFTDMQGLSLFQLNK HHHHHCCCCCCEEECCC >Mature Secondary Structure MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC QYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLAMDIQGLRDQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIF HHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHCCCCCEEEECCCHHHH DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHH NNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YKAFTDMQGLSLFQLNK HHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8158647; 8905232; 9278503; 1447789 [H]