| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is yceQ [H]
Identifier: 82544450
GI number: 82544450
Start: 1951800
End: 1952327
Strand: Reverse
Name: yceQ [H]
Synonym: SBO_1979
Alternate gene names: 82544450
Gene position: 1952327-1951800 (Counterclockwise)
Preceding gene: 82544452
Following gene: 82544448
Centisome position: 43.19
GC content: 46.78
Gene sequence:
>528_bases GTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGG AAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTACTCTCCAGAAATATTTCCATCTACCGGTAAGGACTGCAACC CGCAGCCCGCTAACTGCCTGAAAGATCAATACGTCTTACGCCATTGCTGCGTGGATGATCGGTCGGGCAAAATGGGTTAT TCCGTAAAATTTCTTGTTTTAACAAGGATGGACACGGAAACGGCTTCATTATTCCACTGCAAGCCTTGTTATAGCAAGAT GACTTTTACCATTTATCACCCGCTTACTCACAGTTTTTATATGAACGCATCCCGTTTGCAAGGCATCCATTGTTTTGACA TGACGGGTAGGTTGCAGCTTTATATCCGGCTTTATTGCAGCCGTAACGCTGCGAGCCCCTATGTAATTCGCCGACTCACC CCTTATTTTCACGGCGGACTTCAAGCCCAAAATACTGTTCAGGTTTAG
Upstream 100 bases:
>100_bases TTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCC GGGTGTGAACCGATGGCCTC
Downstream 100 bases:
>100_bases TGAGTCACGGTCTTACCTGTCTTTGTCATCACTCTGGCCGCCATAGCAACCTTTCAGCATTCACCCTTTTGTTAAGAGTT CATTGTTTAATGGTATCAGC
Product: hypothetical protein
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLT PYFHGGLQAQNTVQV
Sequences:
>Translated_175_residues MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLT PYFHGGLQAQNTVQV >Mature_174_residues SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYS VKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTP YFHGGLQAQNTVQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081829, Length=102, Percent_Identity=98.0392156862745, Blast_Score=215, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020371 - ProDom: PD078424 [H]
Pfam domain/function: PF10848 DUF2655 [H]
EC number: NA
Molecular weight: Translated: 19961; Mature: 19830
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFY HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCHHEE MNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTPYFHGGLQAQNTVQV ECHHHHCCEEEECCCCCEEEEEEEEECCCCCCCHHEECCCHHHCCCCCCCCEECC >Mature Secondary Structure SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL CCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFY HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCHHEE MNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTPYFHGGLQAQNTVQV ECHHHHCCEEEECCCCCEEEEEEEEECCCCCCCHHEECCCHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]