Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yceQ [H]

Identifier: 82544450

GI number: 82544450

Start: 1951800

End: 1952327

Strand: Reverse

Name: yceQ [H]

Synonym: SBO_1979

Alternate gene names: 82544450

Gene position: 1952327-1951800 (Counterclockwise)

Preceding gene: 82544452

Following gene: 82544448

Centisome position: 43.19

GC content: 46.78

Gene sequence:

>528_bases
GTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGTCAGCTCAAAGAGGCGCAGAGTGTCGGTTGCCCGTTTTTCATGCGG
AAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTACTCTCCAGAAATATTTCCATCTACCGGTAAGGACTGCAACC
CGCAGCCCGCTAACTGCCTGAAAGATCAATACGTCTTACGCCATTGCTGCGTGGATGATCGGTCGGGCAAAATGGGTTAT
TCCGTAAAATTTCTTGTTTTAACAAGGATGGACACGGAAACGGCTTCATTATTCCACTGCAAGCCTTGTTATAGCAAGAT
GACTTTTACCATTTATCACCCGCTTACTCACAGTTTTTATATGAACGCATCCCGTTTGCAAGGCATCCATTGTTTTGACA
TGACGGGTAGGTTGCAGCTTTATATCCGGCTTTATTGCAGCCGTAACGCTGCGAGCCCCTATGTAATTCGCCGACTCACC
CCTTATTTTCACGGCGGACTTCAAGCCCAAAATACTGTTCAGGTTTAG

Upstream 100 bases:

>100_bases
TTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCC
GGGTGTGAACCGATGGCCTC

Downstream 100 bases:

>100_bases
TGAGTCACGGTCTTACCTGTCTTTGTCATCACTCTGGCCGCCATAGCAACCTTTCAGCATTCACCCTTTTGTTAAGAGTT
CATTGTTTAATGGTATCAGC

Product: hypothetical protein

Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY
SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLT
PYFHGGLQAQNTVQV

Sequences:

>Translated_175_residues
MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGY
SVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLT
PYFHGGLQAQNTVQV
>Mature_174_residues
SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYS
VKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFYMNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTP
YFHGGLQAQNTVQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081829, Length=102, Percent_Identity=98.0392156862745, Blast_Score=215, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020371
- ProDom:   PD078424 [H]

Pfam domain/function: PF10848 DUF2655 [H]

EC number: NA

Molecular weight: Translated: 19961; Mature: 19830

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL
CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH
KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFY
HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCHHEE
MNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTPYFHGGLQAQNTVQV
ECHHHHCCEEEECCCCCEEEEEEEEECCCCCCCHHEECCCHHHCCCCCCCCEECC
>Mature Secondary Structure 
SSRVANLTVIVSSKRRRVSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCL
CCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHH
KDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFY
HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCHHEE
MNASRLQGIHCFDMTGRLQLYIRLYCSRNAASPYVIRRLTPYFHGGLQAQNTVQV
ECHHHHCCEEEECCCCCEEEEEEEEECCCCCCCHHEECCCHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; Proton; O2; 3-phenylpropionate [C]

Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]