| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is fhuE [H]
Identifier: 82544432
GI number: 82544432
Start: 1933934
End: 1935970
Strand: Direct
Name: fhuE [H]
Synonym: SBO_1961
Alternate gene names: 82544432
Gene position: 1933934-1935970 (Clockwise)
Preceding gene: 82544431
Following gene: 161984919
Centisome position: 42.79
GC content: 50.12
Gene sequence:
>2037_bases TTGGCAGCATTACCCGAAAATGATTACAGCGTAACGTCTACCTCTGCGGGTACCAAAATGCAGATGACTCAACGTGATAT TCCTCAGTCGGTCACTATTGTTAGCCAGCAGCGGATGGAAGATCAGCAGTTACAAACGCTGGGCGAAGTGATGGAAAACA CGCTGGAGATCAGCAAAAGTCAGGCGGATTCCGATCGTGCTCTTTATTATTCCCGCGGATTCCAGATCGATAACTATATG GTTGATGGTATCCCCACCTATTTTGAATCGCGCTGGAATCTGGGCGATGCACTTTCTGATATGGCACTGTTTGAACGCGT AGAAGTAGTGCGTGGCGCGACAGGACTCATGACCGGGACGGGTAATCCATCTGCGGCAATTGATATGGTTCGAAAACACG CGACCAGTCGTGAATTTAAAGGCGATGTCTCGGCGGAATACGGTAGCTGGAACAAAGAACGGTATGTGGCGGATTTACAA AGCCCACTCACCGAAGACGGTAAAATCCGCGCGCGAATTGTCGGCGGCTACCAGAATAACGACTCATGGCTGGACCGCTA CAACAGTGAAAAGACCTTCTTCTCCGGCATTGTCGATGCTGATTTAGGCGATCTTACGACGCTTTCAGCCGGTTACGAAT ATCAGCGCATTGATGTTAATAGCCCTACCTGGGGCGGTTTACCGCGCTGGAATACTGATGGCAGCAGCAACAGTTACGAT CGTGCACGCAGTACCGCACCTGACTGGGCGTACAACGATAAAGAGATCAACAAGGTCTTTATGACCCTGAAGCAGCGGTT TGCTGATACCTGGCAAGCGACACTGAATGCCACCCACTCTGAAGTCGAATTTGACAGCAAAATGATGTATGTCGATGCCT ATGTAAACAAAGCGGATGGTATGCTGGTTGGGCCATACAGTAATTATGGACCTGGCTTTGATTATGTCGGCGGCACCGGT TGGAACAGTGGCAAACGTAAAGTTGATGCGCTGGATTTGTTCGCTGACGGTAGTTATGAATTGTTTGGTCGTCAGCACAA TCTAATGTTTGGTGGCAGTTACAGCAAACAAAACAATCGTTACTTCAGTTCATGGGCCAACATCTTCCCGGATGAAATTG GCAGTTTCTACAACTTTAATGGCAATTTCCCACAAACCGACTGGTCACCACAGAGCCTGGCACAGGACGATACCACACAT ATGAAATCGTTATATGCTGCCACTCGAGTCACCCTTGCCGATCCGCTGCATCTGATCCTCGGCGCACGTTATACCAACTG GCGGGTTGATACGCTGACTTACAGCATGGAGAAAAACCACACCACGCCTTACGCTGGTCTGGTGTTTGACATCAATGACA ACTGGTCGACCTACGCCAGCTATACCTCTATTTTCCAGCCGCAAAATGATCGTGACAGTTCAGGCAAATATCTGGCTCCA ATCACCGGTAACAACTACGAGCTGGGTCTGAAATCGGGCTGGATGAATAGCCGTCTGACCACCACGTTAGCCATCTTCCG TATTGAGCAGGATAATGTCGCTCAGTCCACCGGTACACCTATCCCCGGCAGCAACGGCGAAACCGCCTATAAAGCGGTGG ATGGGACAGTCAGTAAAGGGGTGGAATTTGAACTCAACGGCGCAATTACCGACAACTGGCAGCTGACATTTGGCGCAACG CGCTATATTGCAGAGGATAACGAAGGAAACGCCGTTAATCCTAATCTGCCACGCACCACGGTTAAAATGTTCACCAGCTA TCGGTTGCCTGTCATGCCAGAGTTGACAGTCGGCGGTGGTGTGAACTGGCAAAATCGCGTGTATACCGACACCGTGACAC CGTATGGCACCTTCCGCGCCGAGCAAGGTAGCTACGCGCTGGTGGATCTCTTCACCCGCTACCAGGTGACGAAAAACTTC TCGTTACAGGGGAACGTCAATAACCTGTTCGACAAAACCTACGATACCAACATGGAAGGTTCTATCGTCTACGGCGCACC GCGTAATTTCAGCATTACCGGCACGTATCAATTCTGA
Upstream 100 bases:
>100_bases TTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCA TCATACACTAAATCAGTAAG
Downstream 100 bases:
>100_bases ATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTTAGTCTCCCCAACGTCTTACGGATTAGTGGTTACGGATGTACTC ATCCATCTCGGTTTTCAGGT
Product: ferric-rhodotorulic acid outer membrane transporter
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MAALPENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLEISKSQADSDRALYYSRGFQIDNYM VDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQ SPLTEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTG WNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTH MKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAP ITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGAT RYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNF SLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF
Sequences:
>Translated_678_residues MAALPENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLEISKSQADSDRALYYSRGFQIDNYM VDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQ SPLTEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTG WNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTH MKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAP ITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGAT RYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNF SLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF >Mature_677_residues AALPENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLEISKSQADSDRALYYSRGFQIDNYMV DGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQS PLTEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDR ARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGW NSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHM KSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPI TGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATR YIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFS LQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=673, Percent_Identity=99.1084695393759, Blast_Score=1378, Evalue=0.0, Organism=Escherichia coli, GI1786344, Length=288, Percent_Identity=24.6527777777778, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76029; Mature: 75897
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLEISKS CCCCCCCCCEEEECCCCCEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC QADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGT CCCCCCEEEEECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC GNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNN CCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCC DSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD CHHHHHCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCC MLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNR EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCC YFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLIL HHHHHHHCCHHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCCHHHHH GARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAP CCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEE ITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKG ECCCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCC VEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGG EEEEECCEEECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCC VNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEG CCCCCEEEECCCCCCCCEECCCCCEEEEEHHHHHEEEECEEECCCHHHHHHCCCCCCCCC SIVYGAPRNFSITGTYQF EEEEECCCCEEEEEEECC >Mature Secondary Structure AALPENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLEISKS CCCCCCCCEEEECCCCCEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC QADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGT CCCCCCEEEEECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC GNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNN CCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCC DSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD CHHHHHCCCCCHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADG HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCC MLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNR EEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCC YFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLIL HHHHHHHCCHHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCCHHHHH GARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAP CCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEE ITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKG ECCCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCC VEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGG EEEEECCEEECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCC VNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEG CCCCCEEEECCCCCCCCEECCCCCEEEEEHHHHHEEEECEEECCCHHHHHHCCCCCCCCC SIVYGAPRNFSITGTYQF EEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]