Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yceF [H]

Identifier: 161984919

GI number: 161984919

Start: 1948738

End: 1949322

Strand: Direct

Name: yceF [H]

Synonym: SBO_1976

Alternate gene names: 161984919

Gene position: 1948738-1949322 (Clockwise)

Preceding gene: 82544432

Following gene: 82544449

Centisome position: 43.12

GC content: 50.09

Gene sequence:

>585_bases
ATGCCTAAACTTATTTTAGCCTCCACCTCGCCATGGCGTCGCGCTCTTCTGGAAAAACTGCAAATCTCTTTTGAATGTGC
AGCACCAGAGGTCGACGAAACCCCACGCAGCGACGAATCACCGCGACAGTTGGTGCTTCGACTGGCACAAGAAAAAGCGC
AATCTCTGGCGTCACGTTATCCGGATCATTTAATTATTGGTTCAGACCAGGTATGTGTTCTTGATGGCGAAATCACCGGT
AAACCGTTAACGGAAGAAAATGCCCGTCTGCAATTACGCAAAGCCAGCGGCAATATCGTCACCTTCTATACTGGACTGGC
GTTGTTTAATTCGGCGAATGGGCATCTACAAACAGAAGTGGAGCCTTTTGACGTCCATTTCCGTCACCTGTGCGAGGCGG
AGATTGATAATTACGTGCGTAAGGAGCATCCCCTGCACTGCGCGGGTAGCTTTAAGAGTGAAGGATTTGGCATTACGCTG
TTTGAGCGTTTAGAGGGACGTGACCCTAACACGCTGGTTGGTTTACCGCTAATCGCGCTGTGTCAGATGTTACGTCGGGA
AGGGAAAAACCCGCTGATGGGATAG

Upstream 100 bases:

>100_bases
TTTATTTTCGTTCAGTGCTGATAACGAACATCAACCTGCAAAACGAAGCGCATAGTTTAAAATGGCTATCATCAATACGC
TATATCTGATGGAAAAAAAT

Downstream 100 bases:

>100_bases
TTGTTTGCGCCGGATGCGGTTACGTCGCATCCGGCAATCGGTGCAGGCGGCCTGATGCGGCGTAAACGCCTTATCAGGCC
AACCGCCCATTATCAGGCTT

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITG
KPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG

Sequences:

>Translated_194_residues
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITG
KPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
>Mature_193_residues
PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGK
PLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLF
ERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=7e-14,
Organism=Escherichia coli, GI87081830, Length=194, Percent_Identity=99.4845360824742, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI1789646, Length=185, Percent_Identity=35.6756756756757, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193202443, Length=189, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI78706856, Length=192, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21707; Mature: 21576

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRY
CCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEV
CCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEECC
EPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIAL
CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEHHHCCCCCCEEECCCHHHH
CQMLRREGKNPLMG
HHHHHHCCCCCCCC
>Mature Secondary Structure 
PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRY
CCEEEECCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEV
CCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCCCEEECC
EPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIAL
CHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEHHHCCCCCCEEECCCHHHH
CQMLRREGKNPLMG
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA