| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is cls [H]
Identifier: 82544298
GI number: 82544298
Start: 1795618
End: 1797078
Strand: Direct
Name: cls [H]
Synonym: SBO_1818
Alternate gene names: 82544298
Gene position: 1795618-1797078 (Clockwise)
Preceding gene: 82544297
Following gene: 161984925
Centisome position: 39.73
GC content: 51.61
Gene sequence:
>1461_bases ATGACAACCGTTTATACGTTGGTGAGTTGGTTGGCCATTCTGGGATACTGGTTGCTCATTGCAGGCGTAACTTTACGCAT TCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTCTGCCGTTAGTCGGAATTATTG CCTATCTTGCCGTTGGCGAGCTCCATTTAGGCAAACGCCGCGCTGAGCGCGCCAGAGCGATGTGGCCTTCCACCGCAAAA TGGCTTAACGACCTTAAAGCCTGTAAGCATATCTTCGCCGAAGAAAATAGCAGTGTCGCTGCGCCATTATTCAAGCTTTG CGAGCGTCGTCAGGGGATCGCTGGGGTCAAAGGGAATCAGCTACAACTGATGACCGAGTCAGATGATGTGATGCAGGCGT TAATCCGCGACATCCAGCTCGCGCGCCATAATATTGAGATTGTGTTTTATATCTGGCAGCCCGGCGGCATGGCGGACCAG GTGGCTGAATCATTAATGGCCGCTGCGCGACGCGGCATTCATTGCCGATTGATGCTCGACTCCGCCGGGAGTGTGGCTTT TTTCCGCAGCCCGTGGCCCGAGCTAATGCGTAATGCCGGTATTGAAGTGGTCGAAGCCTTAAAGGTCAATCTGATGCGTG TGTTTTTACGCCGTATGGACCTGCGCCAACATCGCAAGATGATCATGATCGATAATTACATCGCGTACACCGGCAGCATG AATATGGTCGATCCTCGCTACTTCAAACAAGATGCGGGCGTAGGGCAATGGATTGATCTGATGGCGCGTATGGAAGGCCC CATCGCCACCGCGATGGGGATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAG ATGTCAATATTATGCCGTTTGAACAGGCCAGCGGTCACACCATTCACACAATTGCTTCTGGCCCCGGCTTTCCGGAAGAT CTCATTCACCAGGCATTATTGACTGCGGCTTATTCGGCGCGTGAATATTTGATCATGACCACGCCCTACTTTGTGCCAAG CGATGATTTACTTCATGCGATTTGCACGGCGGCACAGCGCGGGGTGGATGTCAGTATTATCCTTCCGCGAAAAAATGACT CGATGCTGGTCGGCTGGGCCAGTCGCGCATTCTTTACGGAACTTCTTGCTGCTGGGGTTAAAATTTATCAGTTTGAAGGC GGGTTACTGCATACCAAGAGCGTGCTGGTCGATGGCGAACTAAGTCTGGTTGGCACCGTTAACCTTGATATGCGTAGTCT GTGGCTGAATTTCGAGATTACCCTGGCAATCGACGATAAAGGTTTTGGTGCAGACCTTGCCGCCGTTCAGGACGATTATA TTTCGCGTTCACGTCTGCTCGATGCCCGTTTATGGCTAAAACGTCCATTATGGCAACGTGTCGCCGAGCGACTGTTTTAC TTCTTCAGCCCGTTGCTGTAA
Upstream 100 bases:
>100_bases GCCCCCGACGCTGACCAGTGCTTTTCCCGCGTTTTTATTTGCCAGATGAATCCATATGCGTAAACTCATAACAATGCGCT TTCAAAAGGATTTCTAATCT
Downstream 100 bases:
>100_bases AACGTCTCCAACAGAGGTTAAACAGGTAGTGACTATGGATATGGATCTAAACAATCGCCTGACTGAAGATGAAACGCTTG AGCAGGCCTACGATATTTTT
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAK WLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPED LIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEG GLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY FFSPLL
Sequences:
>Translated_486_residues MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAK WLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPED LIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEG GLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY FFSPLL >Mature_485_residues TTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKW LNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQV AESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMN MVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDL IHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGG LLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYF FSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=486, Percent_Identity=99.7942386831276, Blast_Score=995, Evalue=0.0, Organism=Escherichia coli, GI1787007, Length=400, Percent_Identity=25.25, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 54805; Mature: 54674
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCE LQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD EEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEE SAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM CCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCC NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPF CCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEECEEECCCCCCCCCCCCCEEEEC EQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC GVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV CCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCEEEECEEEECCCEEEEEEE NLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY CCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFSPLL HHHCCC >Mature Secondary Structure TTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCE LQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD EEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEE SAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM CCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCC NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPF CCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEECEEECCCCCCCCCCCCCEEEEC EQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHC GVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV CCEEEEEEECCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCEEEECEEEECCCEEEEEEE NLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY CCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFSPLL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA