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The map label for this gene is yciU [C]

Identifier: 161984925

GI number: 161984925

Start: 1797113

End: 1797442

Strand: Direct

Name: yciU [C]

Synonym: SBO_1819

Alternate gene names: 161984925

Gene position: 1797113-1797442 (Clockwise)

Preceding gene: 82544298

Following gene: 82544306

Centisome position: 39.76

GC content: 48.18

Gene sequence:

>330_bases
ATGGATATGGATCTAAACAATCGCCTGACTGAAGATGAAACGCTTGAGCAGGCCTACGATATTTTTCTCGAACTGGCTGC
CGACAATCTCGACCCAGCTGATGTTCTGCTGTTCAATCTTCAGTTTGAAGAGCGCGGCGGCGCGGAGTTATTCGATCCGG
TGGAAGACTGGCAGGAACATGTTGATTTCGATTTGAACCCGGACTTTTTTGCCGAAGTGGTGATTGGTCTGGCGGACAGT
GAGGATGGTGAAATCAACGATGTTTTCGCCCGCATTCTGTTATGCCGCGAAAAAGATCACAAACTTTGCCATATCATCTG
GCGGGAATAA

Upstream 100 bases:

>100_bases
CTAAAACGTCCATTATGGCAACGTGTCGCCGAGCGACTGTTTTACTTCTTCAGCCCGTTGCTGTAAAACGTCTCCAACAG
AGGTTAAACAGGTAGTGACT

Downstream 100 bases:

>100_bases
ATAATCGCTTTCGGCGTGAAAAAGGGCTGACAACTGTCAGCCCTTATTGTGTTTAAAGCGGATCGACTTTCAGGCAAGAA
ACGGCGTGTCTGAAACTCCC

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADS
EDGEINDVFARILLCREKDHKLCHIIWRE

Sequences:

>Translated_109_residues
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADS
EDGEINDVFARILLCREKDHKLCHIIWRE
>Mature_109_residues
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADS
EDGEINDVFARILLCREKDHKLCHIIWRE

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=109, Percent_Identity=99.0825688073395, Blast_Score=216, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 12715; Mature: 12715

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPVEDWQEH
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH
VDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPVEDWQEH
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHH
VDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA