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The map label for this gene is insD1 [C]

Identifier: 82543697

GI number: 82543697

Start: 1178934

End: 1179314

Strand: Direct

Name: insD1 [C]

Synonym: SBO_1181

Alternate gene names: 82543697

Gene position: 1178934-1179314 (Clockwise)

Preceding gene: 82543696

Following gene: 82543698

Centisome position: 26.08

GC content: 55.12

Gene sequence:

>381_bases
GTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGA
TACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCCACGTATGGTTATCGTCGGGTATGGGCGCTGCTTC
GCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTG
CTTGAGCGAAAGCCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATG
GTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACTGTCACGTTCGCGCTGGACTGCTGTGA

Upstream 100 bases:

>100_bases
TCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCT
TAGTCAGCCGTTGTCTCCGG

Downstream 100 bases:

>100_bases
TCGTGAGGCACTGCACTGGGCGGTGACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGG
AACGCCGCTTCGGCAACGAT

Product: IS2 ORF2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNCHVRAGLL

Sequences:

>Translated_126_residues
MSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALL
LERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNCHVRAGLL
>Mature_125_residues
SRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLL
ERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNCHVRAGLL

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,
Organism=Escherichia coli, GI1789424, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,
Organism=Escherichia coli, GI1789224, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,
Organism=Escherichia coli, GI1788305, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,
Organism=Escherichia coli, GI1787669, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,
Organism=Escherichia coli, GI1786558, Length=118, Percent_Identity=99.1525423728814, Blast_Score=245, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14717; Mature: 14586

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELD
CCCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNCH
CCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCE
VRAGLL
EECCCC
>Mature Secondary Structure 
SRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELD
CCCCEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNCH
CCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCE
VRAGLL
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA